Difference between revisions of "RXN-9386"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6309 PWY-6309] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-4...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-902 RXN-902] == * direction: ** LEFT-TO-RIGHT * common name: ** ClpP/crotonase-like domain ** B...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6309 PWY-6309] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-902 RXN-902] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-40674]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** L-tryptophan degradation XI (mammalian, via kynurenine)
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** ClpP/crotonase-like domain
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** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
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** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
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* ec number:
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''8''' reactions found over '''17''' reactions in the full pathway
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* With identifiers:
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* [[2.6.1.7-RXN]]
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** 1 [[E-PHENYLITACONYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CARBOXYMETHYL-HYDROXYPHENYLPROPCOA]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Ec-00_001230]]
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** 1 (E)-2-benzylidenesuccinyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA[c]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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* [[KYNURENINE-3-MONOOXYGENASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** 3 associated gene(s):
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* Gene: [[Ec-06_001380]]
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*** [[Ec-26_002430]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-26_001830]]
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*** Assignment: EC-NUMBER
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*** [[Ec-28_001680]]
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* Gene: [[Ec-16_003560]]
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* [[PWY-5651]]
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* Gene: [[Ec-16_001250]]
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** 0 associated gene:
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-5652]]
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*** Assignment: EC-NUMBER
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** 0 associated gene:
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* Gene: [[Ec-14_006530]]
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* [[RXN-10720]]
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** Source: [[annotation-esiliculosus_genome]]
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** 0 associated gene:
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*** Assignment: AUTOMATED-NAME-MATCH
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** 1 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-esiliculosus_genome]]
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* [[PWY-81]], toluene degradation to benzoyl-CoA (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-81 PWY-81]
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* [[RXN-10721]]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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** 1 associated gene(s):
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== Reconstruction information  ==
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*** [[Ec-00_001230]]
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* Category: [[annotation]]
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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* [[RXN-10722]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-8665]]
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** 1 associated gene(s):
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*** [[Ec-20_001720]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=1.13.11.6-RXN 1.13.11.6-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXY-KYNURENINASE-RXN 3-HYDROXY-KYNURENINASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=ARYLFORMAMIDASE-RXN ARYLFORMAMIDASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=KYNURENINASE-RXN KYNURENINASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-6504 PWY-6504]
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-6504 PWY-6504]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10723 RXN-10723]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-40674}}
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* LIGAND-RXN:
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{{#set: common name=L-tryptophan degradation XI (mammalian, via kynurenine)}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05599 R05599]
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{{#set: reaction found=8}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: total reaction=17}}
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{{#set: common name=ClpP/crotonase-like domain}}
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{{#set: completion rate=47.0}}
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{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
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{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
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{{#set: ec number=EC-4.2.1.17}}
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{{#set: gene associated=Ec-06_001380|Ec-16_003560|Ec-16_001250|Ec-14_006530}}
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{{#set: in pathway=PWY-81}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:15, 21 March 2018

Reaction RXN-902

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ClpP/crotonase-like domain
    • Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
    • enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-81, toluene degradation to benzoyl-CoA (anaerobic): PWY-81
    • 2 reactions found over 6 reactions in the full pathway

Reconstruction information

External links






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