Difference between revisions of "PWY-6082"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7618 PWY-7618] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUCONOLACT-RXN GLUCONOLACT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Lactonase domai...")
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7618 PWY-7618] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUCONOLACT-RXN GLUCONOLACT-RXN] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ricinoleate biosynthesis
+
** Lactonase domain-containing protein
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.1.1.17 EC-3.1.1.17]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''2''' reactions found over '''3''' reactions in the full pathway
+
* With identifiers:
−
* [[RXN-16151]]
+
** 1 [[WATER]][c] '''+''' 1 [[GLC-D-LACTONE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[GLUCONATE]][c]
−
** 1 associated gene(s):
+
* With common name(s):
−
*** [[Ec-16_002160]]
+
** 1 H2O[c] '''+''' 1 D-glucono-1,5-lactone[c] '''=>''' 1 H+[c] '''+''' 1 D-gluconate[c]
−
** 1 reconstruction source(s) associated:
+
 
−
*** [[annotation-esiliculosus_genome]]
+
== Genes associated with this reaction  ==
−
* [[RXN-9670]]
+
Genes have been associated with this reaction based on different elements listed below.
−
** 1 associated gene(s):
+
* Gene: [[Ec-10_002500]]
−
*** [[Ec-16_002160]]
+
** Source: [[annotation-esiliculosus_genome]]
−
** 1 reconstruction source(s) associated:
+
*** Assignment: AUTOMATED-NAME-MATCH
−
*** [[annotation-esiliculosus_genome]]
+
* Gene: [[Ec-21_001990]]
−
== Reaction(s) not found ==
+
** Source: [[annotation-esiliculosus_genome]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16148 RXN-16148]
+
*** Assignment: AUTOMATED-NAME-MATCH
 +
== Pathways  ==
 +
* [[PWY-2221]], Entner-Doudoroff pathway III (semi-phosphorylative): [http://metacyc.org/META/NEW-IMAGE?object=PWY-2221 PWY-2221]
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7165]], L-ascorbate biosynthesis VI (engineered pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7165 PWY-7165]
 +
** '''1''' reactions found over '''7''' reactions in the full pathway
 +
* [[NPGLUCAT-PWY]], Entner-Doudoroff pathway II (non-phosphorylative): [http://metacyc.org/META/NEW-IMAGE?object=NPGLUCAT-PWY NPGLUCAT-PWY]
 +
** '''4''' reactions found over '''9''' reactions in the full pathway
 +
* [[GLUCOSE1PMETAB-PWY]], glucose and glucose-1-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=GLUCOSE1PMETAB-PWY GLUCOSE1PMETAB-PWY]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5530]], sorbitol biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5530 PWY-5530]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[DHGLUCONATE-PYR-CAT-PWY]], glucose degradation (oxidative): [http://metacyc.org/META/NEW-IMAGE?object=DHGLUCONATE-PYR-CAT-PWY DHGLUCONATE-PYR-CAT-PWY]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-33090}}
+
* RHEA:
−
{{#set: common name=ricinoleate biosynthesis}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10440 10440]
−
{{#set: reaction found=2}}
+
* LIGAND-RXN:
−
{{#set: total reaction=3}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01519 R01519]
−
{{#set: completion rate=67.0}}
+
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q01578 Q01578]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Lactonase domain-containing protein}}
 +
{{#set: ec number=EC-3.1.1.17}}
 +
{{#set: gene associated=Ec-10_002500|Ec-21_001990}}
 +
{{#set: in pathway=PWY-2221|PWY-7165|NPGLUCAT-PWY|GLUCOSE1PMETAB-PWY|PWY-5530|DHGLUCONATE-PYR-CAT-PWY}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:15, 21 March 2018

Reaction GLUCONOLACT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Lactonase domain-containing protein
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 D-glucono-1,5-lactone[c] => 1 H+[c] + 1 D-gluconate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-6082&oldid=17020"