Difference between revisions of "PWY-6129"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=OHACYL-COA-DEHYDROG-RXN OHACYL-COA-DEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ssRNAs ssRNAs] == * common name: ** a single-stranded RNA * Synonym(s): ** a ssRNA == Reaction...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=OHACYL-COA-DEHYDROG-RXN OHACYL-COA-DEHYDROG-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ssRNAs ssRNAs] ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
 
* common name:
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** 3-hydroxyacyl-CoA dehydrogenase
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** a single-stranded RNA
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** 6-phosphogluconate dehydrogenase, C-terminal-like
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
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* Synonym(s):
 
* Synonym(s):
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** a ssRNA
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[L-3-HYDROXYACYL-COA]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[3-KETOACYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[2.7.7.8-RXN]]
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** 1 a (3S)-3-hydroxyacyl-CoA[c] '''+''' 1 NAD+[c] '''=>''' 1 a 3-oxoacyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 NADH[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-19_005290]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-14_006530]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways  ==
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* [[PWY-5136]], fatty acid β-oxidation II (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7007]], methyl ketone biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7007 PWY-7007]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* [[PWY66-391]], fatty acid β-oxidation VI (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: common name=a single-stranded RNA}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22432 22432]
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{{#set: common name=a ssRNA}}
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* PIR:
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{{#set: reversible reaction associated=2.7.7.8-RXN}}
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A39592 A39592]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A49613 A49613]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A55045 A55045]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DEPGC DEPGC]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DWRTEP DWRTEP]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4210 JC4210]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4879 JC4879]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JX0199 JX0199]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S32607 S32607]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S36678 S36678]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S40743 S40743]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S54786 S54786]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S57651 S57651]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S74114 S74114]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T10464 T10464]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T46866 T46866]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01778 R01778]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P21177 P21177]
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** [http://www.uniprot.org/uniprot/Q08426 Q08426]
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** [http://www.uniprot.org/uniprot/Q53924 Q53924]
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** [http://www.uniprot.org/uniprot/P07896 P07896]
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** [http://www.uniprot.org/uniprot/Q61425 Q61425]
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** [http://www.uniprot.org/uniprot/Q16836 Q16836]
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** [http://www.uniprot.org/uniprot/P28793 P28793]
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** [http://www.uniprot.org/uniprot/P22414 P22414]
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** [http://www.uniprot.org/uniprot/Q7M0E0 Q7M0E0]
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** [http://www.uniprot.org/uniprot/P34439 P34439]
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** [http://www.uniprot.org/uniprot/Q01373 Q01373]
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** [http://www.uniprot.org/uniprot/P55100 P55100]
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** [http://www.uniprot.org/uniprot/Q39659 Q39659]
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** [http://www.uniprot.org/uniprot/P00348 P00348]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=3-hydroxyacyl-CoA dehydrogenase}}
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{{#set: common name=6-phosphogluconate dehydrogenase, C-terminal-like}}
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{{#set: ec number=EC-1.1.1.35}}
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{{#set: gene associated=Ec-19_005290|Ec-14_006530}}
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{{#set: in pathway=PWY-5136|PWY-7007|FAO-PWY|PWY66-391}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:15, 21 March 2018

Metabolite ssRNAs

  • common name:
    • a single-stranded RNA
  • Synonym(s):
    • a ssRNA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-6129&oldid=17039"