Difference between revisions of "RXN-12959"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-580...")
(Created page with "Category:Gene == Gene Ec-13_001830 == * left end position: ** 3023229 * transcription direction: ** NEGATIVE * right end position: ** 3030914 * centisome position: ** 43.5...")
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361] ==
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== Gene Ec-13_001830 ==
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* taxonomic range:
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* left end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-58024]
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** 3023229
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* common name:
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* transcription direction:
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** phenylpropanoid biosynthesis
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** NEGATIVE
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* right end position:
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** 3030914
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* centisome position:
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** 43.585823   
 
* Synonym(s):
 
* Synonym(s):
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** monolignol biosynthesis
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** Esi_0068_0035
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** lignin biosynthesis
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** Esi0068_0035
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** clpP
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''7''' reactions found over '''15''' reactions in the full pathway
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* Reaction: [[3.4.21.92-RXN]]
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* [[4-COUMARATE--COA-LIGASE-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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** 2 associated gene(s):
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*** Assignment: go-term
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*** [[Ec-04_001280]]
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== Pathways associated ==
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*** [[Ec-10_001480]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-aragem]]
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* [[CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN]]
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** 1 associated gene(s):
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*** [[Ec-28_003750]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[RXN-1101]]
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** 3 associated gene(s):
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*** [[Ec-12_005240]]
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*** [[Ec-23_001220]]
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*** [[Ec-12_001350]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-aragem]]
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* [[RXN-1102]]
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** 1 associated gene(s):
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*** [[Ec-18_002860]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-aragem]]
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* [[RXN-1106]]
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** 3 associated gene(s):
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*** [[Ec-12_005240]]
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*** [[Ec-23_001220]]
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*** [[Ec-12_001350]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-aragem]]
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* [[RXN-1125]]
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** 1 associated gene(s):
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*** [[Ec-18_002860]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-aragem]]
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* [[RXN-1143]]
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** 1 associated gene(s):
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*** [[Ec-01_004720]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=1.14.13.36-RXN 1.14.13.36-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.133-RXN 2.3.1.133-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1142 RXN-1142]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2581 RXN-2581]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2601 RXN-2601]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2602 RXN-2602]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2621 RXN-2621]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2622 RXN-2622]
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== External links  ==
 
== External links  ==
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* ARACYC:
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{{#set: left end position=3023229}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-361 PWY-361]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: taxonomic range=TAX-58024}}
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{{#set: right end position=3030914}}
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{{#set: common name=phenylpropanoid biosynthesis}}
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{{#set: centisome position=43.585823    }}
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{{#set: common name=monolignol biosynthesis|lignin biosynthesis}}
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{{#set: common name=Esi_0068_0035|Esi0068_0035|clpP}}
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{{#set: reaction found=7}}
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{{#set: reaction associated=3.4.21.92-RXN}}
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{{#set: total reaction=15}}
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{{#set: completion rate=47.0}}
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Revision as of 13:15, 21 March 2018

Gene Ec-13_001830

  • left end position:
    • 3023229
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3030914
  • centisome position:
    • 43.585823
  • Synonym(s):
    • Esi_0068_0035
    • Esi0068_0035
    • clpP

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-12959&oldid=17066"