Difference between revisions of "PWY-6691"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLACYLYLCOA-HYDROXY-RXN METHYLACYLYLCOA-HYDROXY-RXN] == * direction: ** REVERSIBLE * common nam...")
(Created page with "Category:Gene == Gene Ec-12_004670 == * left end position: ** 4353110 * transcription direction: ** POSITIVE * right end position: ** 4355020 * centisome position: ** 52.2...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLACYLYLCOA-HYDROXY-RXN METHYLACYLYLCOA-HYDROXY-RXN] ==
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== Gene Ec-12_004670 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 4353110
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* common name:
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* transcription direction:
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** Methylacrylyl-CoA hydratase
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** POSITIVE
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** ClpP/crotonase-like domain
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* right end position:
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** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
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** 4355020
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** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
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* centisome position:
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* ec number:
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** 52.220284   
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
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* Synonym(s):
 
* Synonym(s):
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** Esi_0070_0047
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** Esi0070_0047
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN]]
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** 1 [[CPD-12173]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[METHACRYLYL-COA]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 (S)-3-hydroxy-isobutanoyl-CoA[c] '''<=>''' 1 H2O[c] '''+''' 1 methylacrylyl-CoA[c]
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* Reaction: [[RXN-15043]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-16025]]
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* [[Ec-14_006530]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: automated-name-match
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***AUTOMATED-NAME-MATCH
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* Reaction: [[RXN-16032]]
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** [[pantograph]]-[[aragem]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[Ec-06_001380]]
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*** Assignment: automated-name-match
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** ESILICULOSUS_GENOME
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* Reaction: [[RXN-16066]]
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***EC-NUMBER
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** Source: [[annotation-esiliculosus_genome]]
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* [[Ec-16_003560]]
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*** Assignment: automated-name-match
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** ESILICULOSUS_GENOME
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* Reaction: [[RXN-16067]]
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***EC-NUMBER
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** Source: [[annotation-esiliculosus_genome]]
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* [[Ec-16_001250]]
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*** Assignment: automated-name-match
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** ESILICULOSUS_GENOME
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* Reaction: [[RXN-16076]]
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***EC-NUMBER
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** Source: [[annotation-esiliculosus_genome]]
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* [[Ec-17_000320]]
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*** Assignment: automated-name-match
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** [[pantograph]]-[[aragem]]
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* Reaction: [[RXN-16077]]
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== Pathways  ==
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** Source: [[annotation-esiliculosus_genome]]
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* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
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*** Assignment: automated-name-match
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* Reaction: [[RXN-16118]]
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== Reconstruction information  ==
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** Source: [[annotation-esiliculosus_genome]]
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* Category: [[orthology]]
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*** Assignment: automated-name-match
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-1623]]
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*** Tool: [[pantograph]]
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** Source: [[annotation-esiliculosus_genome]]
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* Category: [[annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17008]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17009]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17010]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17011]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17012]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17013]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17014]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17015]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17019]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17020]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17021]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17022]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17023]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17024]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17729]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN0-5514]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN0-6705]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[TRIGLSYN-PWY]]
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* [[PWY-7411]]
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* [[PWY-7589]]
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* [[PWY-7782]]
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* [[PWY-5667]]
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* [[PWY-5981]]
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* [[PWY-7417]]
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* [[PWY0-1319]]
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* [[PWY-7587]]
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* [[PWY-6453]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=4353110}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31175 31175]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=4355020}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04224 R04224]
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{{#set: centisome position=52.220284    }}
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* UNIPROT:
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{{#set: common name=Esi_0070_0047|Esi0070_0047}}
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** [http://www.uniprot.org/uniprot/P21177 P21177]
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{{#set: reaction associated=1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN|RXN-15043|RXN-16025|RXN-16032|RXN-16066|RXN-16067|RXN-16076|RXN-16077|RXN-16118|RXN-1623|RXN-17008|RXN-17009|RXN-17010|RXN-17011|RXN-17012|RXN-17013|RXN-17014|RXN-17015|RXN-17019|RXN-17020|RXN-17021|RXN-17022|RXN-17023|RXN-17024|RXN-17729|RXN0-5514|RXN0-6705}}
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** [http://www.uniprot.org/uniprot/Q08426 Q08426]
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{{#set: pathway associated=TRIGLSYN-PWY|PWY-7411|PWY-7589|PWY-7782|PWY-5667|PWY-5981|PWY-7417|PWY0-1319|PWY-7587|PWY-6453}}
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** [http://www.uniprot.org/uniprot/O29814 O29814]
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** [http://www.uniprot.org/uniprot/O29299 O29299]
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** [http://www.uniprot.org/uniprot/O34893 O34893]
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** [http://www.uniprot.org/uniprot/O23520 O23520]
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** [http://www.uniprot.org/uniprot/P76082 P76082]
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** [http://www.uniprot.org/uniprot/P64016 P64016]
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** [http://www.uniprot.org/uniprot/P07896 P07896]
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** [http://www.uniprot.org/uniprot/O53419 O53419]
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** [http://www.uniprot.org/uniprot/P94549 P94549]
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** [http://www.uniprot.org/uniprot/Q13825 Q13825]
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** [http://www.uniprot.org/uniprot/P45361 P45361]
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** [http://www.uniprot.org/uniprot/P28793 P28793]
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** [http://www.uniprot.org/uniprot/P14604 P14604]
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** [http://www.uniprot.org/uniprot/P22414 P22414]
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** [http://www.uniprot.org/uniprot/Q7M0E0 Q7M0E0]
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** [http://www.uniprot.org/uniprot/P34559 P34559]
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** [http://www.uniprot.org/uniprot/Q01373 Q01373]
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** [http://www.uniprot.org/uniprot/P55100 P55100]
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** [http://www.uniprot.org/uniprot/P53526 P53526]
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** [http://www.uniprot.org/uniprot/Q39659 Q39659]
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** [http://www.uniprot.org/uniprot/O52797 O52797]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Methylacrylyl-CoA hydratase}}
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{{#set: common name=ClpP/crotonase-like domain}}
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{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
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{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
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{{#set: ec number=EC-4.2.1.17}}
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{{#set: gene associated=Ec-14_006530|Ec-06_001380|Ec-16_003560|Ec-16_001250|Ec-17_000320}}
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{{#set: in pathway=VALDEG-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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−
{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 13:16, 21 March 2018

Gene Ec-12_004670

  • left end position:
    • 4353110
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4355020
  • centisome position:
    • 52.220284
  • Synonym(s):
    • Esi_0070_0047
    • Esi0070_0047

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-6691&oldid=17119"