Difference between revisions of "Cis-delta5-3-hydroxylignoceroyl-ACPs"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14389 RXN-14389] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGINASE-RXN ARGINASE-RXN] == * direction: ** REVERSIBLE * common name: ** Ureohydrolase * ec numbe...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14389 RXN-14389] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGINASE-RXN ARGINASE-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 +
* common name:
 +
** Ureohydrolase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.5.3.1 EC-3.5.3.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Co-chaperone-SP-2Fe2S-Complex]][c] '''+''' 1 [[FeS-Cluster-Chaperones-ATP]][c] '''=>''' 1 [[Chap-ATP-Co-chaperone-SP-2Fe2S-Complex]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[ARG]][c] '''<=>''' 1 [[UREA]][c] '''+''' 1 [[L-ORNITHINE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a [co-chaperone]-[scaffold protein-(2Fe-2S)] complex[c] '''+''' 1 an [Fe-S cluster biosynthesis chaperone]-ATP[c] '''=>''' 1 a [chaperone-ATP]-[co-chaperone]-[scaffold protein-(2Fe-2S)] complex[c]
+
** 1 H2O[c] '''+''' 1 L-arginine[c] '''<=>''' 1 urea[c] '''+''' 1 L-ornithine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-10_001100]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-22_003700]]
 +
** Source: [[orthology-aragem]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7250]], [2Fe-2S] iron-sulfur cluster biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7250 PWY-7250]
+
* [[ARGASEDEG-PWY]], L-arginine degradation I (arginase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGASEDEG-PWY ARGASEDEG-PWY]
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6922]], L-N&delta;-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[ARG-GLU-PWY]], L-arginine degradation VII (arginase 3 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-GLU-PWY ARG-GLU-PWY]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-4984]], urea cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6305]], putrescine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6305 PWY-6305]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: in pathway=PWY-7250}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20569 20569]
−
{{#set: reconstruction category=annotation}}
+
* LIGAND-RXN:
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00551 R00551]
−
{{#set: reconstruction tool=pathwaytools}}
+
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P05089 P05089]
 +
** [http://www.uniprot.org/uniprot/P07824 P07824]
 +
** [http://www.uniprot.org/uniprot/P40906 P40906]
 +
** [http://www.uniprot.org/uniprot/Q7M0Z3 Q7M0Z3]
 +
** [http://www.uniprot.org/uniprot/P14012 P14012]
 +
** [http://www.uniprot.org/uniprot/P37818 P37818]
 +
** [http://www.uniprot.org/uniprot/P49900 P49900]
 +
** [http://www.uniprot.org/uniprot/P39138 P39138]
 +
** [http://www.uniprot.org/uniprot/P53608 P53608]
 +
** [http://www.uniprot.org/uniprot/P72703 P72703]
 +
** [http://www.uniprot.org/uniprot/O68051 O68051]
 +
** [http://www.uniprot.org/uniprot/O49046 O49046]
 +
** [http://www.uniprot.org/uniprot/O76895 O76895]
 +
** [http://www.uniprot.org/uniprot/P33280 P33280]
 +
** [http://www.uniprot.org/uniprot/Q10066 Q10066]
 +
** [http://www.uniprot.org/uniprot/P00812 P00812]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Ureohydrolase}}
 +
{{#set: ec number=EC-3.5.3.1}}
 +
{{#set: gene associated=Ec-10_001100|Ec-22_003700}}
 +
{{#set: in pathway=ARGASEDEG-PWY|PWY-6922|ARG-PRO-PWY|ARG-GLU-PWY|PWY-4984|PWY-6305|CITRULBIO-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 13:16, 21 March 2018

Reaction ARGINASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Ureohydrolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 L-arginine[c] <=> 1 urea[c] + 1 L-ornithine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • ARGASEDEG-PWY, L-arginine degradation I (arginase pathway): ARGASEDEG-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6922, L-Nδ-acetylornithine biosynthesis: PWY-6922
    • 6 reactions found over 7 reactions in the full pathway
  • ARG-PRO-PWY, L-arginine degradation VI (arginase 2 pathway): ARG-PRO-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • ARG-GLU-PWY, L-arginine degradation VII (arginase 3 pathway): ARG-GLU-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-4984, urea cycle: PWY-4984
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6305, putrescine biosynthesis IV: PWY-6305
    • 3 reactions found over 4 reactions in the full pathway
  • CITRULBIO-PWY, L-citrulline biosynthesis: CITRULBIO-PWY
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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