Difference between revisions of "Ferrohemoglobins"

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(Created page with "Category:Gene == Gene Ec-06_002080 == * left end position: ** 1499342 * transcription direction: ** POSITIVE * right end position: ** 1500841 * centisome position: ** 17.1...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRUVATE-CARBOXYLASE-RXN PYRUVATE-CARBOXYLASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-06_002080 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRUVATE-CARBOXYLASE-RXN PYRUVATE-CARBOXYLASE-RXN] ==
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* left end position:
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* direction:
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** 1499342
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** pyruvate carboxylase
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* right end position:
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* ec number:
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** 1500841
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** [http://enzyme.expasy.org/EC/6.4.1.1 EC-6.4.1.1]
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* centisome position:
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** 17.120157   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0350_0023
 
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** Esi0350_0023
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[1.14.13.8-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[HCO3]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[PYRUVATE]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[PROTON]][c]
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***go-term
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* With common name(s):
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* [[RXN66-81]]
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** 1 hydrogen carbonate[c] '''+''' 1 ATP[c] '''+''' 1 pyruvate[c] '''=>''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 oxaloacetate[c] '''+''' 1 H+[c]
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** esiliculosus_genome
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***go-term
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY66-201]]
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* Gene: [[Ec-03_001890]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6142 PWY-6142]
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** '''10''' reactions found over '''14''' reactions in the full pathway
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* [[PWY-6146]], Methanobacterium thermoautotrophicum biosynthetic metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6146 PWY-6146]
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** '''9''' reactions found over '''16''' reactions in the full pathway
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* [[PWY-5750]], itaconate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5750 PWY-5750]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[P42-PWY]], incomplete reductive TCA cycle: [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* [[PWY66-399]], gluconeogenesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399]
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** '''10''' reactions found over '''12''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=1499342}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20844 20844]
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{{#set: right end position=1500841}}
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* LIGAND-RXN:
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{{#set: centisome position=17.120157    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00344 R00344]
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{{#set: common name=Esi_0350_0023|Esi0350_0023}}
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* UNIPROT:
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{{#set: reaction associated=1.14.13.8-RXN|RXN66-81}}
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** [http://www.uniprot.org/uniprot/Q05920 Q05920]
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{{#set: pathway associated=PWY66-201}}
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** [http://www.uniprot.org/uniprot/Q9PNQ4 Q9PNQ4]
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** [http://www.uniprot.org/uniprot/P95127 P95127]
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** [http://www.uniprot.org/uniprot/Q9PP00 Q9PP00]
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** [http://www.uniprot.org/uniprot/Q9CHQ7 Q9CHQ7]
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** [http://www.uniprot.org/uniprot/Q9KWU4 Q9KWU4]
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** [http://www.uniprot.org/uniprot/P11498 P11498]
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** [http://www.uniprot.org/uniprot/P52873 P52873]
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** [http://www.uniprot.org/uniprot/P11154 P11154]
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** [http://www.uniprot.org/uniprot/P32327 P32327]
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** [http://www.uniprot.org/uniprot/O17732 O17732]
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** [http://www.uniprot.org/uniprot/Q9UUE1 Q9UUE1]
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** [http://www.uniprot.org/uniprot/Q16921 Q16921]
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** [http://www.uniprot.org/uniprot/Q9XBJ1 Q9XBJ1]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=pyruvate carboxylase}}
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{{#set: ec number=EC-6.4.1.1}}
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{{#set: gene associated=Ec-03_001890}}
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{{#set: in pathway=PWY-6142|PWY-6146|PWY-5750|P42-PWY|PWY66-399}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:16, 21 March 2018

Reaction PYRUVATE-CARBOXYLASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • pyruvate carboxylase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 hydrogen carbonate[c] + 1 ATP[c] + 1 pyruvate[c] => 1 phosphate[c] + 1 ADP[c] + 1 oxaloacetate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6142, gluconeogenesis II (Methanobacterium thermoautotrophicum): PWY-6142
    • 10 reactions found over 14 reactions in the full pathway
  • PWY-6146, Methanobacterium thermoautotrophicum biosynthetic metabolism: PWY-6146
    • 9 reactions found over 16 reactions in the full pathway
  • PWY-5750, itaconate biosynthesis: PWY-5750
    • 3 reactions found over 4 reactions in the full pathway
  • P42-PWY, incomplete reductive TCA cycle: P42-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY66-399, gluconeogenesis III: PWY66-399
    • 10 reactions found over 12 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ferrohemoglobins&oldid=17143"