Difference between revisions of "Ec-07 007260"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=XANTHOSINE-5-PHOSPHATE XANTHOSINE-5-PHOSPHATE] == * smiles: ** C(OP(=O)([O-])[O-])C1(C(O)C(O)C(...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15830 RXN-15830] == * direction: ** LEFT-TO-RIGHT * common name: ** cytochrome-c oxidase * ec n...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=XANTHOSINE-5-PHOSPHATE XANTHOSINE-5-PHOSPHATE] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15830 RXN-15830] ==
−
* smiles:
+
* direction:
−
** C(OP(=O)([O-])[O-])C1(C(O)C(O)C(O1)N3(C=NC2(C(=O)NC(=O)NC=23)))
+
** LEFT-TO-RIGHT
−
* inchi key:
+
−
** InChIKey=DCTLYFZHFGENCW-UUOKFMHZSA-L
+
 
* common name:
 
* common name:
−
** XMP
+
** cytochrome-c oxidase
−
* molecular weight:
+
* ec number:
−
** 362.192   
+
** [http://enzyme.expasy.org/EC/1.9.3.1 EC-1.9.3.1]
 
* Synonym(s):
 
* Synonym(s):
−
** (9-D-ribosylxanthine) 5'-phosphate
 
−
** xanthosine 5-phosphate
 
−
** xanthosine 5'-phosphate
 
−
** xanthosine-5-P
 
−
** xanthosine-5'-P
 
−
** 9-(5-phospho-β-D-ribosyl)xanthine
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[GMP-SYN-GLUT-RXN]]
+
* With identifiers:
−
* [[XMPXAN-RXN]]
+
** 8 [[PROTON]][c] '''+''' 4 [[Cytochromes-C-Reduced]][e] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 4 [[Cytochromes-C-Oxidized]][e] '''+''' 4 [[PROTON]][e] '''+''' 2 [[WATER]][c]
−
* [[GMP-SYN-NH3-RXN]]
+
* With common name(s):
−
== Reaction(s) known to produce the compound ==
+
** 8 H+[c] '''+''' 4 a reduced c-type cytochrome[e] '''+''' 1 oxygen[c] '''=>''' 4 an oxidized c-type cytochrome[e] '''+''' 4 H+[e] '''+''' 2 H2O[c]
−
* [[RXN0-1603]]
+
 
−
== Reaction(s) of unknown directionality ==
+
== Genes associated with this reaction  ==
−
* [[IMP-DEHYDROG-RXN]]
+
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-01_001120]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-07_006760]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-21_005020]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
== Pathways  ==
 +
* [[PWY-6692]], Fe(II) oxidation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6692 PWY-6692]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* CAS : 523-98-8
+
{{#set: direction=LEFT-TO-RIGHT}}
−
* BIGG : 35623
+
{{#set: common name=cytochrome-c oxidase}}
−
* PUBCHEM:
+
{{#set: ec number=EC-1.9.3.1}}
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=23421208 23421208]
+
{{#set: gene associated=Ec-01_001120|Ec-07_006760|Ec-21_005020}}
−
* HMDB : HMDB01554
+
{{#set: in pathway=PWY-6692}}
−
* LIGAND-CPD:
+
{{#set: reconstruction category=annotation}}
−
** [http://www.genome.jp/dbget-bin/www_bget?C00655 C00655]
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
* CHEMSPIDER:
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.chemspider.com/Chemical-Structure.3859309.html 3859309]
+
−
* CHEBI:
+
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57464 57464]
+
−
* METABOLIGHTS : MTBLC57464
+
−
{{#set: smiles=C(OP(=O)([O-])[O-])C1(C(O)C(O)C(O1)N3(C=NC2(C(=O)NC(=O)NC=23)))}}
+
−
{{#set: inchi key=InChIKey=DCTLYFZHFGENCW-UUOKFMHZSA-L}}
+
−
{{#set: common name=XMP}}
+
−
{{#set: molecular weight=362.192    }}
+
−
{{#set: common name=(9-D-ribosylxanthine) 5'-phosphate|xanthosine 5-phosphate|xanthosine 5'-phosphate|xanthosine-5-P|xanthosine-5'-P|9-(5-phospho-β-D-ribosyl)xanthine}}
+
−
{{#set: consumed by=GMP-SYN-GLUT-RXN|XMPXAN-RXN|GMP-SYN-NH3-RXN}}
+
−
{{#set: produced by=RXN0-1603}}
+
−
{{#set: reversible reaction associated=IMP-DEHYDROG-RXN}}
+

Revision as of 13:18, 21 March 2018

Reaction RXN-15830

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • cytochrome-c oxidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6692, Fe(II) oxidation: PWY-6692
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-07_007260&oldid=17478"