Difference between revisions of "RXN-16380"

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(Created page with "Category:Gene == Gene Ec-14_005260 == * left end position: ** 4846153 * transcription direction: ** NEGATIVE * right end position: ** 4853916 * centisome position: ** 73.8...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOXYKIN-RXN PEPCARBOXYKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphoenol...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-14_005260 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOXYKIN-RXN PEPCARBOXYKIN-RXN] ==
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* left end position:
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* direction:
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** 4846153
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** phosphoenolpyruvate carboxykinase (ATP)
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* right end position:
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* ec number:
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** 4853916
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** [http://enzyme.expasy.org/EC/4.1.1.49 EC-4.1.1.49]
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* centisome position:
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** 73.86947   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0100_0085
 
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** Esi0100_0085
 
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** NIN-like 4
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RIBOFLAVINKIN-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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***go-term
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* With common name(s):
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== Pathways associated ==
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** 1 oxaloacetate[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 phosphoenolpyruvate[c] '''+''' 1 CO2[c]
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* [[PWY66-366]]
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* [[PWY-6168]]
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== Genes associated with this reaction  ==
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* [[RIBOSYN2-PWY]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-5523]]
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* [[Ec-19_002930]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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** [[pantograph]]-[[aragem]]
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== Pathways ==
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* [[PWY-561]], superpathway of glyoxylate cycle and fatty acid degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-561 PWY-561]
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** '''6''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
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** '''9''' reactions found over '''10''' reactions in the full pathway
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* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
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** '''13''' reactions found over '''13''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=4846153}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18617 18617]
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{{#set: right end position=4853916}}
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* LIGAND-RXN:
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{{#set: centisome position=73.86947    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00341 R00341]
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{{#set: common name=Esi_0100_0085|Esi0100_0085|NIN-like 4}}
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* UNIPROT:
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{{#set: reaction associated=RIBOFLAVINKIN-RXN}}
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** [http://www.uniprot.org/uniprot/P10963 P10963]
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{{#set: pathway associated=PWY66-366|PWY-6168|RIBOSYN2-PWY|PWY-5523}}
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** [http://www.uniprot.org/uniprot/Q9PP01 Q9PP01]
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** [http://www.uniprot.org/uniprot/P43923 P43923]
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** [http://www.uniprot.org/uniprot/P22259 P22259]
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** [http://www.uniprot.org/uniprot/P42066 P42066]
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** [http://www.uniprot.org/uniprot/P49292 P49292]
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** [http://www.uniprot.org/uniprot/O49547 O49547]
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** [http://www.uniprot.org/uniprot/Q9T074 Q9T074]
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** [http://www.uniprot.org/uniprot/Q39294 Q39294]
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** [http://www.uniprot.org/uniprot/Q9RC49 Q9RC49]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=phosphoenolpyruvate carboxykinase (ATP)}}
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{{#set: ec number=EC-4.1.1.49}}
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{{#set: gene associated=Ec-19_002930}}
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{{#set: in pathway=PWY-561|PWY-7117|GLUCONEO-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 21:45, 17 March 2018

Reaction PEPCARBOXYKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • phosphoenolpyruvate carboxykinase (ATP)
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-561, superpathway of glyoxylate cycle and fatty acid degradation: PWY-561
    • 6 reactions found over 8 reactions in the full pathway
  • PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type: PWY-7117
    • 9 reactions found over 10 reactions in the full pathway
  • GLUCONEO-PWY, gluconeogenesis I: GLUCONEO-PWY
    • 13 reactions found over 13 reactions in the full pathway

Reconstruction information

External links





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