Difference between revisions of "R222-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=METHIONYL-PEPTIDE METHIONYL-PEPTIDE] == * common name: ** a [protein] N-terminal L-methionine *...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN] == * direction: ** R...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=METHIONYL-PEPTIDE METHIONYL-PEPTIDE] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN] ==
 +
* direction:
 +
** REVERSIBLE
 
* common name:
 
* common name:
−
** a [protein] N-terminal L-methionine
+
** Thiolase-like, subgroup
 +
** Hydroxymethylglutaryl-CoA synthase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.3.3.10 EC-2.3.3.10]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
* [[3.5.1.88-RXN]]
+
** 1 [[ACETOACETYL-COA]][c] '''+''' 1 [[ACETYL-COA]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[3-HYDROXY-3-METHYL-GLUTARYL-COA]][c] '''+''' 1 [[CO-A]][c]
−
== Reaction(s) of unknown directionality ==
+
* With common name(s):
 +
** 1 acetoacetyl-CoA[c] '''+''' 1 acetyl-CoA[c] '''+''' 1 H2O[c] '''<=>''' 1 H+[c] '''+''' 1 (S)-3-hydroxy-3-methylglutaryl-CoA[c] '''+''' 1 coenzyme A[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Ec-19_002030]]
 +
** ESILICULOSUS_GENOME
 +
***EC-NUMBER
 +
* [[Ec-21_004360]]
 +
** ESILICULOSUS_GENOME
 +
***EC-NUMBER
 +
** [[pantograph]]-[[aragem]]
 +
== Pathways  ==
 +
* [[PWY66-367]], ketogenesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-367 PWY66-367]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6174]], mevalonate pathway II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6174 PWY-6174]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-922]], mevalonate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922]
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7391]], isoprene biosynthesis II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391]
 +
** '''7''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7571]], ferrichrome A biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7571 PWY-7571]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7524]], mevalonate pathway III (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7524 PWY-7524]
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=a [protein] N-terminal L-methionine}}
+
* RHEA:
−
{{#set: produced by=3.5.1.88-RXN}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10188 10188]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01978 R01978]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P13704 P13704]
 +
** [http://www.uniprot.org/uniprot/P22791 P22791]
 +
** [http://www.uniprot.org/uniprot/P54870 P54870]
 +
** [http://www.uniprot.org/uniprot/P54869 P54869]
 +
** [http://www.uniprot.org/uniprot/O51626 O51626]
 +
** [http://www.uniprot.org/uniprot/Q9CFA9 Q9CFA9]
 +
** [http://www.uniprot.org/uniprot/P17425 P17425]
 +
** [http://www.uniprot.org/uniprot/Q7LZE7 Q7LZE7]
 +
** [http://www.uniprot.org/uniprot/Q01581 Q01581]
 +
** [http://www.uniprot.org/uniprot/P54961 P54961]
 +
** [http://www.uniprot.org/uniprot/P54839 P54839]
 +
** [http://www.uniprot.org/uniprot/P54874 P54874]
 +
** [http://www.uniprot.org/uniprot/P54868 P54868]
 +
** [http://www.uniprot.org/uniprot/P54873 P54873]
 +
** [http://www.uniprot.org/uniprot/P93773 P93773]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Thiolase-like, subgroup}}
 +
{{#set: common name=Hydroxymethylglutaryl-CoA synthase}}
 +
{{#set: ec number=EC-2.3.3.10}}
 +
{{#set: gene associated=Ec-19_002030|Ec-21_004360}}
 +
{{#set: in pathway=PWY66-367|PWY-6174|PWY-922|PWY-7391|PWY-7571|PWY-7524}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 20:45, 17 March 2018

Reaction HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Thiolase-like, subgroup
    • Hydroxymethylglutaryl-CoA synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-367, ketogenesis: PWY66-367
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-6174, mevalonate pathway II (archaea): PWY-6174
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-922, mevalonate pathway I: PWY-922
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-7391, isoprene biosynthesis II (engineered): PWY-7391
    • 7 reactions found over 8 reactions in the full pathway
  • PWY-7571, ferrichrome A biosynthesis: PWY-7571
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7524, mevalonate pathway III (archaea): PWY-7524
    • 4 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=R222-RXN&oldid=10199"