Difference between revisions of "Ec-21 001490"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5472 RXN-5472] == * direction: ** LEFT-TO-RIGHT * common name: ** dolichyl-phosphate-glucose-gl...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1461 RXN0-1461] == * direction: ** LEFT-TO-RIGHT * common name: ** coproporphyrinogen oxidase,...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5472 RXN-5472] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1461 RXN0-1461] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase
+
** coproporphyrinogen oxidase, putative chloroplast precursor
 +
** coproporphyrinogen oxidase (aerobic), putative chloroplast precursor
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.4.1.256 EC-2.4.1.256]
+
** [http://enzyme.expasy.org/EC/1.3.3.3 EC-1.3.3.3]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-5170]][c] '''+''' 1 [[CPD-166]][c] '''=>''' 1 [[CPD-18076]][c] '''+''' 1 [[DOLICHOLP]][c] '''+''' 1 [[PROTON]][c]
+
** 2 [[PROTON]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[COPROPORPHYRINOGEN_III]][c] '''=>''' 2 [[WATER]][c] '''+''' 2 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PROTOPORPHYRINOGEN]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a (glucosyl)2(mannosyl)9-(N-acetylglucosaminyl)2-diphosphodolichol[c] '''+''' 1 a dolichyl β-D-glucosyl phosphate[c] '''=>''' 1 a (glucosyl)3(mannosyl)9-(N-acetylglucosaminyl)2-diphosphodolichol[c] '''+''' 1 a dolichyl phosphate[c] '''+''' 1 H+[c]
+
** 2 H+[c] '''+''' 1 oxygen[c] '''+''' 1 coproporphyrinogen III[c] '''=>''' 2 H2O[c] '''+''' 2 CO2[c] '''+''' 1 protoporphyrinogen IX[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-18_002280]]
+
* [[Ec-19_005390]]
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
−
***GO-TERM
+
***EC-NUMBER
 +
** [[pantograph]]-[[aragem]]
 +
* [[Ec-08_001470]]
 +
** ESILICULOSUS_GENOME
 +
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
+
* [[PWY0-1415]], superpathway of heme biosynthesis from uroporphyrinogen-III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1415 PWY0-1415]
−
** '''19''' reactions found over '''19''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[HEME-BIOSYNTHESIS-II]], heme biosynthesis I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=HEME-BIOSYNTHESIS-II HEME-BIOSYNTHESIS-II]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7159]], 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159]
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-aragem]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29546 29546]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18257 18257]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R06264 R06264]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03220 R03220]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9RLE1 Q9RLE1]
 +
** [http://www.uniprot.org/uniprot/P36552 P36552]
 +
** [http://www.uniprot.org/uniprot/O25376 O25376]
 +
** [http://www.uniprot.org/uniprot/P36553 P36553]
 +
** [http://www.uniprot.org/uniprot/P33771 P33771]
 +
** [http://www.uniprot.org/uniprot/P43899 P43899]
 +
** [http://www.uniprot.org/uniprot/O25824 O25824]
 +
** [http://www.uniprot.org/uniprot/P54304 P54304]
 +
** [http://www.uniprot.org/uniprot/P11353 P11353]
 +
** [http://www.uniprot.org/uniprot/Q8X8G8 Q8X8G8]
 +
** [http://www.uniprot.org/uniprot/Q9ZC86 Q9ZC86]
 +
** [http://www.uniprot.org/uniprot/P36551 P36551]
 +
** [http://www.uniprot.org/uniprot/P35055 P35055]
 +
** [http://www.uniprot.org/uniprot/P43898 P43898]
 +
** [http://www.uniprot.org/uniprot/P72848 P72848]
 +
** [http://www.uniprot.org/uniprot/P73245 P73245]
 +
** [http://www.uniprot.org/uniprot/P74132 P74132]
 +
** [http://www.uniprot.org/uniprot/Q51676 Q51676]
 +
** [http://www.uniprot.org/uniprot/Q42946 Q42946]
 +
** [http://www.uniprot.org/uniprot/Q42840 Q42840]
 +
** [http://www.uniprot.org/uniprot/Q39581 Q39581]
 +
** [http://www.uniprot.org/uniprot/P95651 P95651]
 +
** [http://www.uniprot.org/uniprot/Q9RFG1 Q9RFG1]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase}}
+
{{#set: common name=coproporphyrinogen oxidase, putative chloroplast precursor}}
−
{{#set: ec number=EC-2.4.1.256}}
+
{{#set: common name=coproporphyrinogen oxidase (aerobic), putative chloroplast precursor}}
−
{{#set: gene associated=Ec-18_002280}}
+
{{#set: ec number=EC-1.3.3.3}}
−
{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
+
{{#set: gene associated=Ec-19_005390|Ec-08_001470}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: in pathway=PWY0-1415|HEME-BIOSYNTHESIS-II|CHLOROPHYLL-SYN|PWY-7159}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=esiliculosus_genome}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 20:48, 17 March 2018

Reaction RXN0-1461

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • coproporphyrinogen oxidase, putative chloroplast precursor
    • coproporphyrinogen oxidase (aerobic), putative chloroplast precursor
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1415, superpathway of heme biosynthesis from uroporphyrinogen-III: PWY0-1415
    • 5 reactions found over 6 reactions in the full pathway
  • HEME-BIOSYNTHESIS-II, heme biosynthesis I (aerobic): HEME-BIOSYNTHESIS-II
    • 4 reactions found over 4 reactions in the full pathway
  • CHLOROPHYLL-SYN, 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): CHLOROPHYLL-SYN
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-7159, 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): PWY-7159
    • 5 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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