Difference between revisions of "2-Me-Branched-234-Sat-FALD"

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(Created page with "Category:Gene == Gene Ec-16_004330 == * left end position: ** 4479527 * transcription direction: ** POSITIVE * right end position: ** 4483642 * centisome position: ** 83.9...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
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[[Category:Gene]]
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[[Category:Pathway]]
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== Gene Ec-16_004330 ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166] ==
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* left end position:
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* taxonomic range:
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** 4479527
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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* transcription direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** POSITIVE
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* common name:
−
* right end position:
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** superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli)
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** 4483642
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−
* centisome position:
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−
** 83.92314   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0227_0056
 
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** Esi0227_0056
 
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** GGPPS1, C-term
 
  
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== Reactions associated ==
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== Reaction(s) found ==
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* [[FARNESYLTRANSTRANSFERASE-RXN]]
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'''14''' reactions found over '''17''' reactions in the full pathway
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** esiliculosus_genome
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* [[CDPREDUCT-RXN]]
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***ec-number
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** 7 associated gene(s):
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** [[pantograph]]-[[aragem]]
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*** [[Ec-06_005120]]
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* [[FPPSYN-RXN]]
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*** [[Ec-11_002170]]
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** [[pantograph]]-[[aragem]]
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*** [[Ec-19_000440]]
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* [[GPPSYN-RXN]]
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*** [[Ec-11_002180]]
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** [[pantograph]]-[[aragem]]
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*** [[Ec-21_002920]]
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== Pathways associated ==
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*** [[Ec-17_003700]]
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* [[PWY-7736]]
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*** [[Ec-06_005570]]
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* [[PWY-7492]]
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** 2 reconstruction source(s) associated:
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* [[PWY-6659]]
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*** [[annotation-esiliculosus_genome]]
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* [[PWY-6383]]
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*** [[orthology-aragem]]
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* [[PWY-6691]]
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* [[DCDPKIN-RXN]]
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* [[PWY-6859]]
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** 7 associated gene(s):
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* [[PWY-7709]]
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*** [[Ec-04_001140]]
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* [[PWY-7102]]
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*** [[Ec-11_005170]]
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* [[PWY-7182]]
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*** [[Ec-03_001380]]
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* [[PWY-5120]]
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*** [[Ec-26_003930]]
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* [[PWY-5123]]
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*** [[Ec-07_000140]]
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* [[PWY-5122]]
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*** [[Ec-22_003280]]
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* [[PWY-7141]]
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*** [[Ec-11_004330]]
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* [[PWY-7720]]
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** 2 reconstruction source(s) associated:
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* [[PWY-7721]]
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*** [[annotation-esiliculosus_genome]]
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* [[PWY-7517]]
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*** [[orthology-aragem]]
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* [[PWY-7410]]
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* [[DTDPKIN-RXN]]
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* [[PWY-7659]]
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** 7 associated gene(s):
 +
*** [[Ec-26_003930]]
 +
*** [[Ec-04_001140]]
 +
*** [[Ec-11_004330]]
 +
*** [[Ec-22_003280]]
 +
*** [[Ec-11_005170]]
 +
*** [[Ec-03_001380]]
 +
*** [[Ec-07_000140]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[DTMPKI-RXN]]
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** 1 associated gene(s):
 +
*** [[Ec-20_004950]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
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* [[DUDPKIN-RXN]]
 +
** 7 associated gene(s):
 +
*** [[Ec-11_005170]]
 +
*** [[Ec-11_004330]]
 +
*** [[Ec-03_001380]]
 +
*** [[Ec-04_001140]]
 +
*** [[Ec-07_000140]]
 +
*** [[Ec-22_003280]]
 +
*** [[Ec-26_003930]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[DUTP-PYROP-RXN]]
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** 1 associated gene(s):
 +
*** [[Ec-13_002810]]
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** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[PWY-7184]]
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** 0 associated gene:
 +
* [[PWY-7187]]
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** 0 associated gene:
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* [[RIBONUCLEOSIDE-DIP-REDUCTII-RXN]]
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** 5 associated gene(s):
 +
*** [[Ec-19_000440]]
 +
*** [[Ec-11_002170]]
 +
*** [[Ec-21_002920]]
 +
*** [[Ec-06_005120]]
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*** [[Ec-06_005570]]
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** 1 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
* [[RXN0-722]]
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** 5 associated gene(s):
 +
*** [[Ec-06_005120]]
 +
*** [[Ec-11_002170]]
 +
*** [[Ec-21_002920]]
 +
*** [[Ec-06_005570]]
 +
*** [[Ec-19_000440]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN0-723]]
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** 1 associated gene(s):
 +
*** [[Ec-04_006460]]
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** 1 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
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* [[RXN0-724]]
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** 1 associated gene(s):
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*** [[Ec-04_006460]]
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** 1 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
* [[THYMIDYLATESYN-RXN]]
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** 1 associated gene(s):
 +
*** [[Ec-27_004630]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
* [[UDPREDUCT-RXN]]
 +
** 7 associated gene(s):
 +
*** [[Ec-19_000440]]
 +
*** [[Ec-21_002920]]
 +
*** [[Ec-17_003700]]
 +
*** [[Ec-11_002180]]
 +
*** [[Ec-06_005120]]
 +
*** [[Ec-06_005570]]
 +
*** [[Ec-11_002170]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=DCTP-DEAM-RXN DCTP-DEAM-RXN]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=4479527}}
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* ECOCYC:
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{{#set: transcription direction=POSITIVE}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY0-166 PWY0-166]
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{{#set: right end position=4483642}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: centisome position=83.92314    }}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=Esi_0227_0056|Esi0227_0056|GGPPS1, C-term}}
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{{#set: common name=superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli)}}
−
{{#set: reaction associated=FARNESYLTRANSTRANSFERASE-RXN|FPPSYN-RXN|GPPSYN-RXN}}
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{{#set: reaction found=14}}
−
{{#set: pathway associated=PWY-7736|PWY-7492|PWY-6659|PWY-6383|PWY-6691|PWY-6859|PWY-7709|PWY-7102|PWY-7182|PWY-5120|PWY-5123|PWY-5122|PWY-7141|PWY-7720|PWY-7721|PWY-7517|PWY-7410|PWY-7659}}
+
{{#set: total reaction=17}}
 +
{{#set: completion rate=82.0}}

Revision as of 21:52, 17 March 2018

Pathway PWY0-166

  • taxonomic range:
  • common name:
    • superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli)
  • Synonym(s):

Reaction(s) found

14 reactions found over 17 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=2-Me-Branched-234-Sat-FALD&oldid=10730"