Difference between revisions of "PORPHOBILINOGEN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISPH2-RXN ISPH2-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 4-hydroxy-3-methylbut-2-eny...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISPH2-RXN ISPH2-RXN] == |
| − | * | + | * direction: |
| − | ** | + | ** LEFT-TO-RIGHT |
* common name: | * common name: | ||
| − | ** | + | ** 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/1.17.7.4 EC-1.17.7.4] | ||
* Synonym(s): | * Synonym(s): | ||
| − | |||
| − | == Reaction(s) | + | == Reaction Formula == |
| − | ''' | + | * With identifiers: |
| − | * [[ | + | ** 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 1 [[HYDROXY-METHYL-BUTENYL-DIP]][c] '''=>''' 1 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[WATER]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] |
| − | + | * With common name(s): | |
| − | * [[ | + | ** 2 H+[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 1 (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate[c] '''=>''' 1 isopentenyl diphosphate[c] '''+''' 1 H2O[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] |
| − | * [[ | + | |
| − | + | == Genes associated with this reaction == | |
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * [[Ec-06_002680]] | ||
| + | ** ESILICULOSUS_GENOME | ||
| + | ***EC-NUMBER | ||
| + | ** [[pantograph]]-[[aragem]] | ||
| + | == Pathways == | ||
| + | * [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY] | ||
| + | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560] | ||
| + | ** '''9''' reactions found over '''9''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-aragem]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-esiliculosus_genome]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: common name= | + | ** [http://www.genome.jp/dbget-bin/www_bget?R08209 R08209] |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R05884 R05884] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=4-hydroxy-3-methylbut-2-enyl diphosphate reductase}} |
| − | {{#set: | + | {{#set: ec number=EC-1.17.7.4}} |
| + | {{#set: gene associated=Ec-06_002680}} | ||
| + | {{#set: in pathway=NONMEVIPP-PWY|PWY-7560}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Revision as of 20:53, 17 March 2018
Contents
Reaction ISPH2-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 2 PROTON[c] + 2 Reduced-ferredoxins[c] + 1 HYDROXY-METHYL-BUTENYL-DIP[c] => 1 DELTA3-ISOPENTENYL-PP[c] + 1 WATER[c] + 2 Oxidized-ferredoxins[c]
- With common name(s):
- 2 H+[c] + 2 a reduced ferredoxin [iron-sulfur] cluster[c] + 1 (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate[c] => 1 isopentenyl diphosphate[c] + 1 H2O[c] + 2 an oxidized ferredoxin [iron-sulfur] cluster[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Ec-06_002680
- ESILICULOSUS_GENOME
- EC-NUMBER
- pantograph-aragem
- ESILICULOSUS_GENOME
Pathways
- NONMEVIPP-PWY, methylerythritol phosphate pathway I: NONMEVIPP-PWY
- 8 reactions found over 9 reactions in the full pathway
- PWY-7560, methylerythritol phosphate pathway II: PWY-7560
- 9 reactions found over 9 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-aragem
- Tool: pantograph
- Source: orthology-aragem
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome
External links
