Difference between revisions of "PWY-6611"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8675 RXN-8675] == * direction: ** LEFT-TO-RIGHT * common name: ** Tetrapyrrole methylase, subdo...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEROXID-RXN PEROXID-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** peroxidase * ec number:...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8675 RXN-8675] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEROXID-RXN PEROXID-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Tetrapyrrole methylase, subdomain 2
+
** peroxidase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.11.1.7 EC-1.11.1.7]
 
* Synonym(s):
 
* Synonym(s):
−
** uroporphyrinogen methyltransferase
 
−
** uroporphyrinogen-III methyltransferase
 
−
** adenosylmethionine-uroporphyrinogen III methyltransferase
 
−
** S-adenosyl-L-methionine-dependent uroporphyrinogen III methylase
 
−
** SirA
 
−
** CysG
 
−
** uroporphyrin-III C-methyltransferase (incorrect)
 
−
** S-adenosyl-L-methionine:uroporphyrin-III C-methyltransferase (incorrect)
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-9038]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[DIHYDROSIROHYDROCHLORIN]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
+
** 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 2 [[Phenolic-Donors]][c] '''=>''' 2 [[WATER]][c] '''+''' 2 [[Phenoxyl-rad-of-phenolic-donors]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 precorrin-1[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 precorrin-2[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
+
** 1 hydrogen peroxide[c] '''+''' 2 a phenolic donor[c] '''=>''' 2 H2O[c] '''+''' 2 a phenoxyl radical of a phenolic donor[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-06_004170]]
+
* [[Ec-11_003410]]
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
−
***EC-NUMBER
+
***GO-TERM
 +
* [[Ec-00_010030]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-14_002880]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-05_003380]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-08_006020]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-16_000240]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-00_008220]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-14_006530]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-24_002030]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-19_000230]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-11_001530]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-06_003550]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-04_004690]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-02_000470]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-20_002770]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-00_008240]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-00_008250]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-02_001210]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-27_004950]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-05_002520]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-24_002370]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-17_002450]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-02_003170]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-00_008210]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-02_001740]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-28_003740]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-26_000310]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-17_002430]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-02_001880]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-19_001450]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7376]], cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7376 PWY-7376]
 
−
** '''2''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-7377]], cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7377 PWY-7377]
 
−
** '''3''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-5194]], siroheme biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5194 PWY-5194]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5196]], factor 430 biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5196 PWY-5196]
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* UNIPROT:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21972 21972]
+
** [http://www.uniprot.org/uniprot/P11678 P11678]
−
* LIGAND-RXN:
+
** [http://www.uniprot.org/uniprot/P80025 P80025]
−
** [http://www.genome.jp/dbget-bin/www_bget?R07238 R07238]
+
** [http://www.uniprot.org/uniprot/P22195 P22195]
 +
** [http://www.uniprot.org/uniprot/P11965 P11965]
 +
** [http://www.uniprot.org/uniprot/P05164 P05164]
 +
** [http://www.uniprot.org/uniprot/P22196 P22196]
 +
** [http://www.uniprot.org/uniprot/P13029 P13029]
 +
** [http://www.uniprot.org/uniprot/Q42853 Q42853]
 +
** [http://www.uniprot.org/uniprot/Q26059 Q26059]
 +
** [http://www.uniprot.org/uniprot/O24081 O24081]
 +
** [http://www.uniprot.org/uniprot/Q43790 Q43790]
 +
** [http://www.uniprot.org/uniprot/Q43791 Q43791]
 +
** [http://www.uniprot.org/uniprot/O24080 O24080]
 +
** [http://www.uniprot.org/uniprot/P22079 P22079]
 +
** [http://www.uniprot.org/uniprot/P17179 P17179]
 +
** [http://www.uniprot.org/uniprot/P17180 P17180]
 +
** [http://www.uniprot.org/uniprot/Q24926 Q24926]
 +
** [http://www.uniprot.org/uniprot/Q43854 Q43854]
 +
** [http://www.uniprot.org/uniprot/P14412 P14412]
 +
** [http://www.uniprot.org/uniprot/P24101 P24101]
 +
** [http://www.uniprot.org/uniprot/P24102 P24102]
 +
** [http://www.uniprot.org/uniprot/P00434 P00434]
 +
** [http://www.uniprot.org/uniprot/P00433 P00433]
 +
** [http://www.uniprot.org/uniprot/Q9S913 Q9S913]
 +
** [http://www.uniprot.org/uniprot/Q9S912 Q9S912]
 +
** [http://www.uniprot.org/uniprot/Q9S911 Q9S911]
 +
** [http://www.uniprot.org/uniprot/P15232 P15232]
 +
** [http://www.uniprot.org/uniprot/P15233 P15233]
 +
** [http://www.uniprot.org/uniprot/P15003 P15003]
 +
** [http://www.uniprot.org/uniprot/P15004 P15004]
 +
** [http://www.uniprot.org/uniprot/P15984 P15984]
 +
** [http://www.uniprot.org/uniprot/P11247 P11247]
 +
** [http://www.uniprot.org/uniprot/P12437 P12437]
 +
** [http://www.uniprot.org/uniprot/P06181 P06181]
 +
** [http://www.uniprot.org/uniprot/P19135 P19135]
 +
** [http://www.uniprot.org/uniprot/Q05855 Q05855]
 +
** [http://www.uniprot.org/uniprot/Q43212 Q43212]
 +
** [http://www.uniprot.org/uniprot/Q42517 Q42517]
 +
** [http://www.uniprot.org/uniprot/Q7M1X2 Q7M1X2]
 +
** [http://www.uniprot.org/uniprot/Q01548 Q01548]
 +
** [http://www.uniprot.org/uniprot/Q43006 Q43006]
 +
** [http://www.uniprot.org/uniprot/Q40069 Q40069]
 +
** [http://www.uniprot.org/uniprot/Q16771 Q16771]
 +
** [http://www.uniprot.org/uniprot/P16147 P16147]
 +
** [http://www.uniprot.org/uniprot/Q01603 Q01603]
 +
** [http://www.uniprot.org/uniprot/Q12575 Q12575]
 +
** [http://www.uniprot.org/uniprot/Q43774 Q43774]
 +
** [http://www.uniprot.org/uniprot/Q42854 Q42854]
 +
** [http://www.uniprot.org/uniprot/Q9SMU8 Q9SMU8]
 +
** [http://www.uniprot.org/uniprot/Q43158 Q43158]
 +
** [http://www.uniprot.org/uniprot/Q07446 Q07446]
 +
** [http://www.uniprot.org/uniprot/Q43032 Q43032]
 +
** [http://www.uniprot.org/uniprot/Q41577 Q41577]
 +
** [http://www.uniprot.org/uniprot/Q43218 Q43218]
 +
** [http://www.uniprot.org/uniprot/Q43219 Q43219]
 +
** [http://www.uniprot.org/uniprot/Q43220 Q43220]
 +
** [http://www.uniprot.org/uniprot/Q55110 Q55110]
 +
** [http://www.uniprot.org/uniprot/Q96518 Q96518]
 +
** [http://www.uniprot.org/uniprot/O22510 O22510]
 +
** [http://www.uniprot.org/uniprot/O80912 O80912]
 +
** [http://www.uniprot.org/uniprot/Q40486 Q40486]
 +
** [http://www.uniprot.org/uniprot/Q40487 Q40487]
 +
** [http://www.uniprot.org/uniprot/Q40555 Q40555]
 +
** [http://www.uniprot.org/uniprot/Q42964 Q42964]
 +
** [http://www.uniprot.org/uniprot/Q43004 Q43004]
 +
** [http://www.uniprot.org/uniprot/P37834 P37834]
 +
** [http://www.uniprot.org/uniprot/P37835 P37835]
 +
** [http://www.uniprot.org/uniprot/P93675 P93675]
 +
** [http://www.uniprot.org/uniprot/O24523 O24523]
 +
** [http://www.uniprot.org/uniprot/O49866 O49866]
 +
** [http://www.uniprot.org/uniprot/Q43731 Q43731]
 +
** [http://www.uniprot.org/uniprot/Q9SZE7 Q9SZE7]
 +
** [http://www.uniprot.org/uniprot/O22443 O22443]
 +
** [http://www.uniprot.org/uniprot/Q9SZB9 Q9SZB9]
 +
** [http://www.uniprot.org/uniprot/P27337 P27337]
 +
** [http://www.uniprot.org/uniprot/Q40068 Q40068]
 +
** [http://www.uniprot.org/uniprot/O64970 O64970]
 +
** [http://www.uniprot.org/uniprot/Q42784 Q42784]
 +
** [http://www.uniprot.org/uniprot/Q43499 Q43499]
 +
** [http://www.uniprot.org/uniprot/Q07445 Q07445]
 +
** [http://www.uniprot.org/uniprot/O22602 O22602]
 +
** [http://www.uniprot.org/uniprot/O65029 O65029]
 +
** [http://www.uniprot.org/uniprot/P93545 P93545]
 +
** [http://www.uniprot.org/uniprot/P93546 P93546]
 +
** [http://www.uniprot.org/uniprot/P93547 P93547]
 +
** [http://www.uniprot.org/uniprot/P93548 P93548]
 +
** [http://www.uniprot.org/uniprot/P93549 P93549]
 +
** [http://www.uniprot.org/uniprot/P93550 P93550]
 +
** [http://www.uniprot.org/uniprot/P93551 P93551]
 +
** [http://www.uniprot.org/uniprot/P93552 P93552]
 +
** [http://www.uniprot.org/uniprot/P93553 P93553]
 +
** [http://www.uniprot.org/uniprot/O49940 O49940]
 +
** [http://www.uniprot.org/uniprot/O49941 O49941]
 +
** [http://www.uniprot.org/uniprot/O49943 O49943]
 +
** [http://www.uniprot.org/uniprot/O49942 O49942]
 +
** [http://www.uniprot.org/uniprot/Q40949 Q40949]
 +
** [http://www.uniprot.org/uniprot/Q40950 Q40950]
 +
** [http://www.uniprot.org/uniprot/Q40366 Q40366]
 +
** [http://www.uniprot.org/uniprot/Q40367 Q40367]
 +
** [http://www.uniprot.org/uniprot/O24336 O24336]
 +
** [http://www.uniprot.org/uniprot/Q39652 Q39652]
 +
** [http://www.uniprot.org/uniprot/Q39653 Q39653]
 +
** [http://www.uniprot.org/uniprot/Q08671 Q08671]
 +
** [http://www.uniprot.org/uniprot/Q9SUT2 Q9SUT2]
 +
** [http://www.uniprot.org/uniprot/Q96522 Q96522]
 +
** [http://www.uniprot.org/uniprot/O81266 O81266]
 +
** [http://www.uniprot.org/uniprot/Q20616 Q20616]
 +
** [http://www.uniprot.org/uniprot/Q23490 Q23490]
 +
** [http://www.uniprot.org/uniprot/O59651 O59651]
 +
** [http://www.uniprot.org/uniprot/O31066 O31066]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Tetrapyrrole methylase, subdomain 2}}
+
{{#set: common name=peroxidase}}
−
{{#set: common name=uroporphyrinogen methyltransferase|uroporphyrinogen-III methyltransferase|adenosylmethionine-uroporphyrinogen III methyltransferase|S-adenosyl-L-methionine-dependent uroporphyrinogen III methylase|SirA|CysG|uroporphyrin-III C-methyltransferase (incorrect)|S-adenosyl-L-methionine:uroporphyrin-III C-methyltransferase (incorrect)}}
+
{{#set: ec number=EC-1.11.1.7}}
−
{{#set: gene associated=Ec-06_004170}}
+
{{#set: gene associated=Ec-11_003410|Ec-00_010030|Ec-14_002880|Ec-05_003380|Ec-08_006020|Ec-16_000240|Ec-00_008220|Ec-14_006530|Ec-24_002030|Ec-19_000230|Ec-11_001530|Ec-06_003550|Ec-04_004690|Ec-02_000470|Ec-20_002770|Ec-00_008240|Ec-00_008250|Ec-02_001210|Ec-27_004950|Ec-05_002520|Ec-24_002370|Ec-17_002450|Ec-02_003170|Ec-00_008210|Ec-02_001740|Ec-28_003740|Ec-26_000310|Ec-17_002430|Ec-02_001880|Ec-19_001450}}
−
{{#set: in pathway=PWY-7376|PWY-7377|PWY-5194|PWY-5196}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Revision as of 20:56, 17 March 2018

Reaction PEROXID-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • peroxidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-6611&oldid=10981"