Difference between revisions of "Ec-06 008930"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7873 RXN-7873] == * direction: ** REVERSIBLE * common name: ** Alpha-1,3-mannosyl-glycoprotein...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ADENOSYLCOBALAMIN ADENOSYLCOBALAMIN] == * smiles: ** CC%15(C=C%13(C(N%12(C%14(OC(CO)C(OP([O-])(...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7873 RXN-7873] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ADENOSYLCOBALAMIN ADENOSYLCOBALAMIN] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** CC%15(C=C%13(C(N%12(C%14(OC(CO)C(OP([O-])(=O)OC(C)CNC(=O)CCC1(C(CC(N)=O)C2(C4(C)(C(C)(CC(N)=O)C(CCC(=O)N)C3(C(C)=C6(C(CC(=O)N)(C(CCC(N)=O)C5(C=C8(C(C)(C)C(CCC(N)=O)C7(C(C)=C1N2[Co---]([N+]=34)([N+]=56)([N+]=78)(CC9(C(C(O)C(O9)N%10(C=NC%11(C%10=NC=NC=%11N)))O))[N+](=C%12)%13))))C)))))(C))C(O)%14)))=CC(C)=%15))
 +
* inchi key:
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** InChIKey=ZIHHMGTYZOSFRC-YGHJOQEPSA-L
 
* common name:
 
* common name:
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** Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase, family GT54
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** adenosylcobalamin
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/2.4.1.145 EC-2.4.1.145]
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** 1579.596   
 
* Synonym(s):
 
* Synonym(s):
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** IV
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** coenzyme B12
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** N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase
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** cobamide coenzyme
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** deoxyadenosylcobalamin
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** cobamamide
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** vitamin B12
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** cobamamid
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** 5,6-dimethylbenzimidazolyl-5-deoxyadenosyl-cobamide
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** (5'-deoxy-5'-adenosyl)cobamide coenzyme
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** (5,6-dimethylbenzimidazolyl)cobamide coenzyme
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** 5'-deoxy-5'-adenosylcobalamin
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** 5'-deoxyadenosyl vitamin B12
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** 5'-deoxyadenosyl-5,6-dimethylbenzimidazolylcobamide
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** 5'-deoxyadenosylcobalamin
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** 5,6-dimethylbenzimidazolyl-Co-5'-deoxyadenosylcobamide
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** calomide
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** cobalamin coenzyme
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** dibencozide
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** funacomide
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[TransportSeed_ADENOSYLCOBALAMIN]]
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** 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''+''' 1 [[GLUCOSAMINYL-ETCETERA-MANNOSYL-R]][c] '''<=>''' 1 [[GLUCOSAMINYL-14-ETCETERA-MANNOSYL-R]][c] '''+''' 1 [[UDP]][c] '''+''' 1 [[PROTON]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[TransportSeed_ADENOSYLCOBALAMIN]]
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** 1 UDP-N-acetyl-&alpha;-D-glucosamine[c] '''+''' 1 (N-acetyl-&beta;-D-glucosaminyl-1,2)-&alpha;-D-mannosyl-1,3-(&beta;-N-acetyl-D-glucosaminyl-1,2-&alpha;-D-mannosyl-1,6)-&beta;-D-mannosyl-R[c] '''<=>''' 1 N-acetyl-&beta;-D-glucosaminyl-1,4-(N-acetyl-D-glucosaminyl-1,2)-&alpha;-D-mannosyl-1,3-(&beta;-N-acetyl-D-glucosaminyl-1,2-&alpha;-D-mannosyl-1,6)-&beta;-D-mannosyl-R[c] '''+''' 1 UDP[c] '''+''' 1 H+[c]
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* [[COBALADENOSYLTRANS-RXN]]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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* [[ExchangeSeed_ADENOSYLCOBALAMIN]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-07_006930]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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{{#set: direction=REVERSIBLE}}
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* CAS : 13870-90-1
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{{#set: common name=Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase, family GT54}}
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* BIGG : 34204
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{{#set: ec number=EC-2.4.1.145}}
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* PUBCHEM:
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{{#set: common name=IV|N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=91820207 91820207]
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{{#set: gene associated=Ec-07_006930}}
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* HMDB : HMDB02086
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{{#set: in pathway=}}
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* LIGAND-CPD:
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{{#set: reconstruction category=annotation}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00194 C00194]
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{{#set: reconstruction tool=pathwaytools}}
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* CHEBI:
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{{#set: reconstruction source=esiliculosus_genome}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=18408 18408]
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* METABOLIGHTS : MTBLC18408
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{{#set: smiles=CC%15(C=C%13(C(N%12(C%14(OC(CO)C(OP([O-])(=O)OC(C)CNC(=O)CCC1(C(CC(N)=O)C2(C4(C)(C(C)(CC(N)=O)C(CCC(=O)N)C3(C(C)=C6(C(CC(=O)N)(C(CCC(N)=O)C5(C=C8(C(C)(C)C(CCC(N)=O)C7(C(C)=C1N2[Co---]([N+]=34)([N+]=56)([N+]=78)(CC9(C(C(O)C(O9)N%10(C=NC%11(C%10=NC=NC=%11N)))O))[N+](=C%12)%13))))C)))))(C))C(O)%14)))=CC(C)=%15))}}
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{{#set: inchi key=InChIKey=ZIHHMGTYZOSFRC-YGHJOQEPSA-L}}
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{{#set: common name=adenosylcobalamin}}
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{{#set: molecular weight=1579.596    }}
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{{#set: common name=coenzyme B12|cobamide coenzyme|deoxyadenosylcobalamin|cobamamide|vitamin B12|cobamamid|5,6-dimethylbenzimidazolyl-5-deoxyadenosyl-cobamide|(5'-deoxy-5'-adenosyl)cobamide coenzyme|(5,6-dimethylbenzimidazolyl)cobamide coenzyme|5'-deoxy-5'-adenosylcobalamin|5'-deoxyadenosyl vitamin B12|5'-deoxyadenosyl-5,6-dimethylbenzimidazolylcobamide|5'-deoxyadenosylcobalamin|5,6-dimethylbenzimidazolyl-Co-5'-deoxyadenosylcobamide|calomide|cobalamin coenzyme|dibencozide|funacomide}}
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{{#set: consumed by=TransportSeed_ADENOSYLCOBALAMIN}}
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{{#set: produced by=TransportSeed_ADENOSYLCOBALAMIN|COBALADENOSYLTRANS-RXN}}
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{{#set: reversible reaction associated=ExchangeSeed_ADENOSYLCOBALAMIN}}

Revision as of 20:58, 17 March 2018

Metabolite ADENOSYLCOBALAMIN

  • smiles:
    • CC%15(C=C%13(C(N%12(C%14(OC(CO)C(OP([O-])(=O)OC(C)CNC(=O)CCC1(C(CC(N)=O)C2(C4(C)(C(C)(CC(N)=O)C(CCC(=O)N)C3(C(C)=C6(C(CC(=O)N)(C(CCC(N)=O)C5(C=C8(C(C)(C)C(CCC(N)=O)C7(C(C)=C1N2[Co---]([N+]=34)([N+]=56)([N+]=78)(CC9(C(C(O)C(O9)N%10(C=NC%11(C%10=NC=NC=%11N)))O))[N+](=C%12)%13))))C)))))(C))C(O)%14)))=CC(C)=%15))
  • inchi key:
    • InChIKey=ZIHHMGTYZOSFRC-YGHJOQEPSA-L
  • common name:
    • adenosylcobalamin
  • molecular weight:
    • 1579.596
  • Synonym(s):
    • coenzyme B12
    • cobamide coenzyme
    • deoxyadenosylcobalamin
    • cobamamide
    • vitamin B12
    • cobamamid
    • 5,6-dimethylbenzimidazolyl-5-deoxyadenosyl-cobamide
    • (5'-deoxy-5'-adenosyl)cobamide coenzyme
    • (5,6-dimethylbenzimidazolyl)cobamide coenzyme
    • 5'-deoxy-5'-adenosylcobalamin
    • 5'-deoxyadenosyl vitamin B12
    • 5'-deoxyadenosyl-5,6-dimethylbenzimidazolylcobamide
    • 5'-deoxyadenosylcobalamin
    • 5,6-dimethylbenzimidazolyl-Co-5'-deoxyadenosylcobamide
    • calomide
    • cobalamin coenzyme
    • dibencozide
    • funacomide

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 13870-90-1
  • BIGG : 34204
  • PUBCHEM:
  • HMDB : HMDB02086
  • LIGAND-CPD:
  • CHEBI:
  • METABOLIGHTS : MTBLC18408
"CC%15(C=C%13(C(N%12(C%14(OC(CO)C(OP([O-])(=O)OC(C)CNC(=O)CCC1(C(CC(N)=O)C2(C4(C)(C(C)(CC(N)=O)C(CCC(=O)N)C3(C(C)=C6(C(CC(=O)N)(C(CCC(N)=O)C5(C=C8(C(C)(C)C(CCC(N)=O)C7(C(C)=C1N2[Co---]([N+]=34)([N+]=56)([N+]=78)(CC9(C(C(O)C(O9)N%10(C=NC%11(C%10=NC=NC=%11N)))O))[N+](=C%12)%13))))C)))))(C))C(O)%14)))=CC(C)=%15))" cannot be used as a page name in this wiki.




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