Difference between revisions of "URACIL"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN] == * direction: ** LEFT-TO-RIG...")
 
(Created page with "Category:Gene == Gene Ec-18_001290 == * left end position: ** 1231021 * transcription direction: ** NEGATIVE * right end position: ** 1240790 * centisome position: ** 24.9...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN] ==
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== Gene Ec-18_001290 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1231021
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* common name:
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* transcription direction:
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** pseudouridine synthase
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** NEGATIVE
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** Pseudouridine synthase I, TruA, C-terminal
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* right end position:
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* ec number:
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** 1240790
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** [http://enzyme.expasy.org/EC/5.4.99.12 EC-5.4.99.12]
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* centisome position:
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** 24.98745   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0020_0181
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** Esi0020_0181
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** MPDH2
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[MANNPDEHYDROG-RXN]]
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** 1 [[tRNA-uridine-38-40]][c] '''=>''' 1 [[tRNA-pseudouridine-38-40]][c]
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** esiliculosus_genome
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* With common name(s):
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***ec-number
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** 1 a uridine38-40 in tRNA[c] '''=>''' 1 a pseudouridine38-40 in tRNA[c]
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== Pathways associated ==
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* [[MANNIDEG-PWY]]
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== Genes associated with this reaction  ==
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* [[PWY-6531]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-08_003150]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-09_003890]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-28_003620]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-14_001350]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-07_006750]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-06_009680]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-01_000690]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-17_003530]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-21_005910]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-06_004490]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-07_000310]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-01_008790]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-06_003220]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-27_005240]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-20_000700]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-14_001540]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-04_001540]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-19_003680]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-20_003420]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-27_004410]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-22_001870]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-26_004180]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-14_001340]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-14_000160]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-05_002890]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways ==
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=1231021}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03020 R03020]
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{{#set: transcription direction=NEGATIVE}}
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* UNIPROT:
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{{#set: right end position=1240790}}
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** [http://www.uniprot.org/uniprot/Q59069 Q59069]
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{{#set: centisome position=24.98745    }}
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** [http://www.uniprot.org/uniprot/P47428 P47428]
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{{#set: common name=Esi_0020_0181|Esi0020_0181|MPDH2}}
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** [http://www.uniprot.org/uniprot/P45291 P45291]
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{{#set: reaction associated=MANNPDEHYDROG-RXN}}
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** [http://www.uniprot.org/uniprot/Q45557 Q45557]
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{{#set: pathway associated=MANNIDEG-PWY|PWY-6531}}
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** [http://www.uniprot.org/uniprot/Q50291 Q50291]
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** [http://www.uniprot.org/uniprot/P53167 P53167]
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** [http://www.uniprot.org/uniprot/Q12211 Q12211]
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** [http://www.uniprot.org/uniprot/P73295 P73295]
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** [http://www.uniprot.org/uniprot/P07649 P07649]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=pseudouridine synthase}}
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{{#set: common name=Pseudouridine synthase I, TruA, C-terminal}}
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{{#set: ec number=EC-5.4.99.12}}
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{{#set: gene associated=Ec-08_003150|Ec-09_003890|Ec-28_003620|Ec-14_001350|Ec-07_006750|Ec-06_009680|Ec-01_000690|Ec-17_003530|Ec-21_005910|Ec-06_004490|Ec-07_000310|Ec-01_008790|Ec-06_003220|Ec-27_005240|Ec-20_000700|Ec-14_001540|Ec-04_001540|Ec-19_003680|Ec-20_003420|Ec-27_004410|Ec-22_001870|Ec-26_004180|Ec-14_001340|Ec-14_000160|Ec-05_002890}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 20:59, 17 March 2018

Gene Ec-18_001290

  • left end position:
    • 1231021
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 1240790
  • centisome position:
    • 24.98745
  • Synonym(s):
    • Esi_0020_0181
    • Esi0020_0181
    • MPDH2

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=URACIL&oldid=11158"