Difference between revisions of "LCYSDESULF-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACONITATEHYDR-RXN ACONITATEHYDR-RXN] == * direction: ** REVERSIBLE * common name: ** cis-aconitate...") |
|||
Line 1: | Line 1: | ||
− | [[Category: | + | [[Category:Reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACONITATEHYDR-RXN ACONITATEHYDR-RXN] == |
− | * | + | * direction: |
− | ** | + | ** REVERSIBLE |
* common name: | * common name: | ||
− | ** | + | ** cis-aconitate hydratase |
+ | ** Aconitate hydratase, | ||
+ | ** Aconitase/3-isopropylmalate dehydratase, swivel | ||
* Synonym(s): | * Synonym(s): | ||
− | |||
− | == Reaction(s) | + | == Reaction Formula == |
− | ''' | + | * With identifiers: |
− | * [[ | + | ** 1 [[WATER]][c] '''+''' 1 [[CIS-ACONITATE]][c] '''<=>''' 1 [[THREO-DS-ISO-CITRATE]][c] |
− | == | + | * With common name(s): |
+ | ** 1 H2O[c] '''+''' 1 cis-aconitate[c] '''<=>''' 1 D-threo-isocitrate[c] | ||
+ | |||
+ | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * [[Ec-12_000170]] | ||
+ | ** ESILICULOSUS_GENOME | ||
+ | ***AUTOMATED-NAME-MATCH | ||
+ | * [[Ec-16_001000]] | ||
+ | ** ESILICULOSUS_GENOME | ||
+ | ***EC-NUMBER | ||
+ | == Pathways == | ||
+ | * [[PWY-5913]], partial TCA cycle (obligate autotrophs): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913] | ||
+ | ** '''10''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY-6969]], TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6969 PWY-6969] | ||
+ | ** '''10''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[PWY-6549]], L-glutamine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6549 PWY-6549] | ||
+ | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-5392]], reductive TCA cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5392 PWY-5392] | ||
+ | ** '''6''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[TCA]], TCA cycle I (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=TCA TCA] | ||
+ | ** '''9''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[P23-PWY]], reductive TCA cycle I: [http://metacyc.org/META/NEW-IMAGE?object=P23-PWY P23-PWY] | ||
+ | ** '''10''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase): [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY] | ||
+ | ** '''9''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[GLYOXYLATE-BYPASS]], glyoxylate cycle: [http://metacyc.org/META/NEW-IMAGE?object=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS] | ||
+ | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[FERMENTATION-PWY]], mixed acid fermentation: [http://metacyc.org/META/NEW-IMAGE?object=FERMENTATION-PWY FERMENTATION-PWY] | ||
+ | ** '''8''' reactions found over '''16''' reactions in the full pathway | ||
+ | * [[PWY-6728]], methylaspartate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6728 PWY-6728] | ||
+ | ** '''11''' reactions found over '''18''' reactions in the full pathway | ||
+ | * [[REDCITCYC]], TCA cycle VIII (helicobacter): [http://metacyc.org/META/NEW-IMAGE?object=REDCITCYC REDCITCYC] | ||
+ | ** '''5''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-7254]], TCA cycle VII (acetate-producers): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7254 PWY-7254] | ||
+ | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-7124]], ethylene biosynthesis V (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7124 PWY-7124] | ||
+ | ** '''8''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398] | ||
+ | ** '''10''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY-5690]], TCA cycle II (plants and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5690 PWY-5690] | ||
+ | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * Category: [[annotation]] | ||
+ | ** Source: [[annotation-esiliculosus_genome]] | ||
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
− | * | + | * RHEA: |
− | ** [http:// | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22144 22144] |
− | {{#set: | + | * LIGAND-RXN: |
− | {{#set: common name= | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01900 R01900] |
− | {{#set: common name= | + | {{#set: direction=REVERSIBLE}} |
− | {{#set: | + | {{#set: common name=cis-aconitate hydratase}} |
− | {{#set: | + | {{#set: common name=Aconitate hydratase,}} |
− | {{#set: | + | {{#set: common name=Aconitase/3-isopropylmalate dehydratase, swivel}} |
+ | {{#set: gene associated=Ec-12_000170|Ec-16_001000}} | ||
+ | {{#set: in pathway=PWY-5913|PWY-6969|PWY-6549|PWY-5392|TCA|P23-PWY|P105-PWY|GLYOXYLATE-BYPASS|FERMENTATION-PWY|PWY-6728|REDCITCYC|PWY-7254|PWY-7124|PWY66-398|PWY-5690}} | ||
+ | {{#set: reconstruction category=annotation}} | ||
+ | {{#set: reconstruction source=annotation-esiliculosus_genome}} | ||
+ | {{#set: reconstruction tool=pathwaytools}} |
Revision as of 21:01, 17 March 2018
Contents
Reaction ACONITATEHYDR-RXN
- direction:
- REVERSIBLE
- common name:
- cis-aconitate hydratase
- Aconitate hydratase,
- Aconitase/3-isopropylmalate dehydratase, swivel
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 WATER[c] + 1 CIS-ACONITATE[c] <=> 1 THREO-DS-ISO-CITRATE[c]
- With common name(s):
- 1 H2O[c] + 1 cis-aconitate[c] <=> 1 D-threo-isocitrate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Ec-12_000170
- ESILICULOSUS_GENOME
- AUTOMATED-NAME-MATCH
- ESILICULOSUS_GENOME
- Ec-16_001000
- ESILICULOSUS_GENOME
- EC-NUMBER
- ESILICULOSUS_GENOME
Pathways
- PWY-5913, partial TCA cycle (obligate autotrophs): PWY-5913
- 10 reactions found over 11 reactions in the full pathway
- PWY-6969, TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase): PWY-6969
- 10 reactions found over 12 reactions in the full pathway
- PWY-6549, L-glutamine biosynthesis III: PWY-6549
- 8 reactions found over 9 reactions in the full pathway
- PWY-5392, reductive TCA cycle II: PWY-5392
- 6 reactions found over 12 reactions in the full pathway
- TCA, TCA cycle I (prokaryotic): TCA
- 9 reactions found over 10 reactions in the full pathway
- P23-PWY, reductive TCA cycle I: P23-PWY
- 10 reactions found over 12 reactions in the full pathway
- P105-PWY, TCA cycle IV (2-oxoglutarate decarboxylase): P105-PWY
- 9 reactions found over 11 reactions in the full pathway
- GLYOXYLATE-BYPASS, glyoxylate cycle: GLYOXYLATE-BYPASS
- 6 reactions found over 6 reactions in the full pathway
- FERMENTATION-PWY, mixed acid fermentation: FERMENTATION-PWY
- 8 reactions found over 16 reactions in the full pathway
- PWY-6728, methylaspartate cycle: PWY-6728
- 11 reactions found over 18 reactions in the full pathway
- REDCITCYC, TCA cycle VIII (helicobacter): REDCITCYC
- 5 reactions found over 9 reactions in the full pathway
- PWY-7254, TCA cycle VII (acetate-producers): PWY-7254
- 7 reactions found over 9 reactions in the full pathway
- PWY-7124, ethylene biosynthesis V (engineered): PWY-7124
- 8 reactions found over 10 reactions in the full pathway
- PWY66-398, TCA cycle III (animals): PWY66-398
- 10 reactions found over 11 reactions in the full pathway
- PWY-5690, TCA cycle II (plants and fungi): PWY-5690
- 8 reactions found over 9 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome
External links