Difference between revisions of "CPD-8608"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3422 RXN-3422] == * direction: ** LEFT-TO-RIGHT * common name: ** Protein of unknown function D...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7782 PWY-7782] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-3...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3422 RXN-3422] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7782 PWY-7782] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
 
* common name:
 
* common name:
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** Protein of unknown function DUF858, methyltransferase-like
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** plasmalogen biosynthesis
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* ec number:
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** [http://enzyme.expasy.org/EC/2.1.1.68 EC-2.1.1.68]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''6''' reactions found over '''16''' reactions in the full pathway
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[5-HYDROXY-FERULIC-ACID]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[SINAPATE]][c]
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* [[2.7.7.14-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 5-hydroxyferulate[c] '''=>''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 sinapate[c]
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*** [[Ec-07_004830]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-aragem]]
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* [[Ec-01_004720]]
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* [[2.7.7.15-RXN]]
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** ESILICULOSUS_GENOME
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** 1 associated gene(s):
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***EC-NUMBER
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*** [[Ec-15_001610]]
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== Pathways  ==
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** 2 reconstruction source(s) associated:
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* [[PWY-2181]], free phenylpropanoid acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2181 PWY-2181]
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*** [[annotation-esiliculosus_genome]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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*** [[orthology-aragem]]
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== Reconstruction information  ==
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* [[CHOLINE-KINASE-RXN]]
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* [[annotation]]:
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** 1 associated gene(s):
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** [[pathwaytools]]:
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*** [[Ec-16_004110]]
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*** [[esiliculosus_genome]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[ETHANOLAMINE-KINASE-RXN]]
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** 1 associated gene(s):
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*** [[Ec-16_004110]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-17729]]
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** 4 associated gene(s):
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*** [[Ec-12_004670]]
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*** [[Ec-02_006160]]
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*** [[Ec-26_001280]]
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*** [[Ec-21_003240]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-5641]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.42-RXN 2.3.1.42-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=2.7.8.22-RXN 2.7.8.22-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=ALKYLGLYCERONE-PHOSPHATE-SYNTHASE-RXN ALKYLGLYCERONE-PHOSPHATE-SYNTHASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17728 RXN-17728]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17730 RXN-17730]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17731 RXN-17731]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17732 RXN-17732]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17733 RXN-17733]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17734 RXN-17734]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9344 RXN-9344]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33208}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02379 R02379]
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{{#set: common name=plasmalogen biosynthesis}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=6}}
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{{#set: common name=Protein of unknown function DUF858, methyltransferase-like}}
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{{#set: total reaction=16}}
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{{#set: ec number=EC-2.1.1.68}}
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{{#set: completion rate=38.0}}
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{{#set: gene associated=Ec-01_004720}}
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{{#set: in pathway=PWY-2181}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 22:02, 17 March 2018

Pathway PWY-7782

  • taxonomic range:
  • common name:
    • plasmalogen biosynthesis
  • Synonym(s):

Reaction(s) found

6 reactions found over 16 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD-8608&oldid=11360"