Difference between revisions of "Ec-01 000230"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTDPKIN-RXN DTDPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** nucleoside diphosphate...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5668 PWY-5668] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTDPKIN-RXN DTDPKIN-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5668 PWY-5668] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** nucleoside diphosphate kinase
+
** cardiolipin biosynthesis I
−
** Nucleoside diphosphate kinase
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''2''' reactions found over '''3''' reactions in the full pathway
−
** 1 [[ATP]][c] '''+''' 1 [[TDP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[TTP]][c]
+
* [[PGPPHOSPHA-RXN]]
−
* With common name(s):
+
** 0 associated gene:
−
** 1 ATP[c] '''+''' 1 dTDP[c] '''=>''' 1 ADP[c] '''+''' 1 dTTP[c]
+
** 1 reconstruction source(s) associated:
−
 
+
*** [[annotation-esiliculosus_genome]]
−
== Genes associated with this reaction  ==
+
* [[PHOSPHAGLYPSYN-RXN]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** 1 associated gene(s):
−
* [[Ec-26_003930]]
+
*** [[Ec-11_001460]]
−
** ESILICULOSUS_GENOME
+
** 2 reconstruction source(s) associated:
−
***GO-TERM
+
*** [[annotation-esiliculosus_genome]]
−
* [[Ec-04_001140]]
+
*** [[orthology-aragem]]
−
** ESILICULOSUS_GENOME
+
== Reaction(s) not found ==
−
***GO-TERM
+
* [http://metacyc.org/META/NEW-IMAGE?object=CARDIOLIPSYN-RXN CARDIOLIPSYN-RXN]
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-11_005170]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-03_001380]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-11_004330]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-07_000140]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-22_003280]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
== Pathways  ==
+
−
* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210]
+
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
−
* [[PWY-7198]], pyrimidine deoxyribonucleotides de novo biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7198 PWY-7198]
+
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
+
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-7187]], pyrimidine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7187 PWY-7187]
+
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-7197]], pyrimidine deoxyribonucleotide phosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7197 PWY-7197]
+
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
+
−
** '''14''' reactions found over '''17''' reactions in the full pathway
+
−
* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545]
+
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[aragem]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* ECOCYC:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27682 27682]
+
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-5668 PWY-5668]
−
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-2}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02093 R02093]
+
{{#set: common name=cardiolipin biosynthesis I}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reaction found=2}}
−
{{#set: common name=nucleoside diphosphate kinase}}
+
{{#set: total reaction=3}}
−
{{#set: common name=Nucleoside diphosphate kinase}}
+
{{#set: completion rate=67.0}}
−
{{#set: ec number=EC-2.7.4.6}}
+
−
{{#set: gene associated=Ec-26_003930|Ec-04_001140|Ec-11_005170|Ec-03_001380|Ec-11_004330|Ec-07_000140|Ec-22_003280}}
+
−
{{#set: in pathway=PWY-7210|PWY-7198|PWY-7184|PWY-7187|PWY-7197|PWY0-166|PWY-6545}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=aragem}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Revision as of 21:04, 17 March 2018

Pathway PWY-5668

  • taxonomic range:
  • common name:
    • cardiolipin biosynthesis I
  • Synonym(s):

Reaction(s) found

2 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links



Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-01_000230&oldid=11471"