Difference between revisions of "PWY-5408"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-313 RXN66-313] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-beta hydroxysteroid dehyd...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11989 RXN-11989] == * direction: ** LEFT-TO-RIGHT * common name: ** Carotenoid oxygenase * ec n...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-313 RXN66-313] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11989 RXN-11989] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 3-beta hydroxysteroid dehydrogenase/isomerase
+
** Carotenoid oxygenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.170 EC-1.1.1.170]
+
** [http://enzyme.expasy.org/EC/1.13.11.59 EC-1.13.11.59]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-4577]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''=>''' 1 [[CPD-4578]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c]
+
** 1 [[CPD-7953]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[PRENAL]][c] '''+''' 1 [[CPD-12935]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 4α-carboxy-4β-methyl-5α-cholesta-8,24-dien-3β-ol[c] '''+''' 1 NAD(P)+[c] '''=>''' 1 3-dehydro-4-methylzymosterol[c] '''+''' 1 CO2[c] '''+''' 1 NAD(P)H[c]
+
** 1 torulene[c] '''+''' 1 oxygen[c] '''=>''' 1 3-methyl-2-butenal[c] '''+''' 1 4'-apo-β-carotenal[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-21_001850]]
+
* [[Ec-21_004930]]
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
−
***EC-NUMBER
+
***AUTOMATED-NAME-MATCH
 +
* [[Ec-20_002250]]
 +
** ESILICULOSUS_GENOME
 +
***AUTOMATED-NAME-MATCH
 +
* [[Ec-06_002830]]
 +
** ESILICULOSUS_GENOME
 +
***AUTOMATED-NAME-MATCH
 +
* [[Ec-18_002140]]
 +
** ESILICULOSUS_GENOME
 +
***AUTOMATED-NAME-MATCH
 +
* [[Ec-06_002810]]
 +
** ESILICULOSUS_GENOME
 +
***AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY66-341]], cholesterol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-341 PWY66-341]
+
* [[PWY-6681]], neurosporaxanthin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6681 PWY-6681]
−
** '''9''' reactions found over '''22''' reactions in the full pathway
+
** '''2''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6074]], zymosterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6074 PWY-6074]
+
−
** '''4''' reactions found over '''12''' reactions in the full pathway
+
−
* [[PWY66-4]], cholesterol biosynthesis III (via desmosterol): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-4 PWY66-4]
+
−
** '''9''' reactions found over '''22''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33448 33448]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31522 31522]
−
* LIGAND-RXN:
+
−
** [http://www.genome.jp/dbget-bin/www_bget?R07494 R07494]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=3-beta hydroxysteroid dehydrogenase/isomerase}}
+
{{#set: common name=Carotenoid oxygenase}}
−
{{#set: ec number=EC-1.1.1.170}}
+
{{#set: ec number=EC-1.13.11.59}}
−
{{#set: gene associated=Ec-21_001850}}
+
{{#set: gene associated=Ec-21_004930|Ec-20_002250|Ec-06_002830|Ec-18_002140|Ec-06_002810}}
−
{{#set: in pathway=PWY66-341|PWY-6074|PWY66-4}}
+
{{#set: in pathway=PWY-6681}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Revision as of 21:05, 17 March 2018

Reaction RXN-11989

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Carotenoid oxygenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 torulene[c] + 1 oxygen[c] => 1 3-methyl-2-butenal[c] + 1 4'-apo-β-carotenal[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6681, neurosporaxanthin biosynthesis: PWY-6681
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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