Difference between revisions of "Trans-D3-cis-D5-dodecenoyl-ACPs"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRAISOM-RXN PRAISOM-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Indole-3-glycerol phosp...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENODEAMIN-RXN ADENODEAMIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Adenosine/AMP d...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRAISOM-RXN PRAISOM-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENODEAMIN-RXN ADENODEAMIN-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Indole-3-glycerol phosphate synthase
+
** Adenosine/AMP deaminase domain
 +
** adenosine deaminase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/5.3.1.24 EC-5.3.1.24]
+
** [http://enzyme.expasy.org/EC/3.5.4.4 EC-3.5.4.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[N-5-PHOSPHORIBOSYL-ANTHRANILATE]][c] '''=>''' 1 [[CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P]][c]
+
** 1 [[ADENOSINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[INOSINE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 N-(5-phosphoribosyl)-anthranilate[c] '''=>''' 1 1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate[c]
+
** 1 adenosine[c] '''+''' 1 H+[c] '''+''' 1 H2O[c] '''=>''' 1 ammonium[c] '''+''' 1 inosine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-08_003020]]
+
* [[Ec-04_003130]]
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
−
***EC-NUMBER
+
***GO-TERM
 +
* [[Ec-00_010560]]
 +
** ESILICULOSUS_GENOME
 +
***AUTOMATED-NAME-MATCH
 
** [[pantograph]]-[[aragem]]
 
** [[pantograph]]-[[aragem]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[TRPSYN-PWY]], L-tryptophan biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=TRPSYN-PWY TRPSYN-PWY]
+
* [[PWY0-1296]], purine ribonucleosides degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1296 PWY0-1296]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6609]], adenine and adenosine salvage III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6609 PWY-6609]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6611]], adenine and adenosine salvage V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6611 PWY-6611]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=SALVADEHYPOX-PWY SALVADEHYPOX-PWY]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-aragem]]
−
*** [[aragem]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21540 21540]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24408 24408]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03509 R03509]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01560 R01560]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P16923 P16923]
+
** [http://www.uniprot.org/uniprot/P22333 P22333]
−
** [http://www.uniprot.org/uniprot/O67853 O67853]
+
** [http://www.uniprot.org/uniprot/P00813 P00813]
−
** [http://www.uniprot.org/uniprot/P12289 P12289]
+
** [http://www.uniprot.org/uniprot/P03958 P03958]
−
** [http://www.uniprot.org/uniprot/P42393 P42393]
+
** [http://www.uniprot.org/uniprot/Q9CIR9 Q9CIR9]
−
** [http://www.uniprot.org/uniprot/Q9PIF3 Q9PIF3]
+
** [http://www.uniprot.org/uniprot/P55266 P55266]
−
** [http://www.uniprot.org/uniprot/Q57893 Q57893]
+
** [http://www.uniprot.org/uniprot/P53984 P53984]
−
** [http://www.uniprot.org/uniprot/P20167 P20167]
+
−
** [http://www.uniprot.org/uniprot/Q9JVD1 Q9JVD1]
+
−
** [http://www.uniprot.org/uniprot/P00910 P00910]
+
−
** [http://www.uniprot.org/uniprot/P00909 P00909]
+
−
** [http://www.uniprot.org/uniprot/P00912 P00912]
+
−
** [http://www.uniprot.org/uniprot/P13997 P13997]
+
−
** [http://www.uniprot.org/uniprot/P50857 P50857]
+
−
** [http://www.uniprot.org/uniprot/P27710 P27710]
+
−
** [http://www.uniprot.org/uniprot/P17218 P17218]
+
−
** [http://www.uniprot.org/uniprot/P00908 P00908]
+
−
** [http://www.uniprot.org/uniprot/P18483 P18483]
+
−
** [http://www.uniprot.org/uniprot/Q02002 Q02002]
+
−
** [http://www.uniprot.org/uniprot/Q56320 Q56320]
+
−
** [http://www.uniprot.org/uniprot/Q01128 Q01128]
+
−
** [http://www.uniprot.org/uniprot/P74435 P74435]
+
−
** [http://www.uniprot.org/uniprot/Q9YGB1 Q9YGB1]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Indole-3-glycerol phosphate synthase}}
+
{{#set: common name=Adenosine/AMP deaminase domain}}
−
{{#set: ec number=EC-5.3.1.24}}
+
{{#set: common name=adenosine deaminase}}
−
{{#set: gene associated=Ec-08_003020}}
+
{{#set: ec number=EC-3.5.4.4}}
−
{{#set: in pathway=TRPSYN-PWY}}
+
{{#set: gene associated=Ec-04_003130|Ec-00_010560}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=PWY0-1296|PWY-6609|PWY-6611|SALVADEHYPOX-PWY}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=aragem}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Revision as of 21:08, 17 March 2018

Reaction ADENODEAMIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Adenosine/AMP deaminase domain
    • adenosine deaminase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 adenosine[c] + 1 H+[c] + 1 H2O[c] => 1 ammonium[c] + 1 inosine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1296, purine ribonucleosides degradation: PWY0-1296
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-6609, adenine and adenosine salvage III: PWY-6609
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6611, adenine and adenosine salvage V: PWY-6611
    • 1 reactions found over 3 reactions in the full pathway
  • SALVADEHYPOX-PWY, adenosine nucleotides degradation II: SALVADEHYPOX-PWY
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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