Difference between revisions of "CPD-2961"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=General-Protein-Substrates General-Protein-Substrates] == * common name: ** a protein * Synonym...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.61-RXN 4.2.1.61-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=General-Protein-Substrates General-Protein-Substrates] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.61-RXN 4.2.1.61-RXN] ==
−
* common name:
+
* direction:
−
** a protein
+
** LEFT-TO-RIGHT
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
 
* Synonym(s):
 
* Synonym(s):
 +
** D-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase
 +
** β-hydroxypalmitoyl-acyl carrier protein dehydrase
 +
** β-hydroxypalmitoyl thioester dehydratase
 +
** β-hydroxypalmityl-ACP dehydrase
 +
** (3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase
 +
** (3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase (hexadec-2-enoyl-[acyl-carrier protein]-forming)
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[3.4.25.1-RXN]]
+
* With identifiers:
−
* [[3.4.23.34-RXN]]
+
** 1 [[R-3-Hydroxypalmitoyl-ACPs]][c] '''=>''' 1 [[2-Hexadecenoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
−
* [[3.4.21.92-RXN]]
+
* With common name(s):
−
* [[3.4.22.16-RXN]]
+
** 1 a (3R)-3-hydroxypalmitoyl-[acp][c] '''=>''' 1 a trans hexadecenoyl-[acp][c] '''+''' 1 H2O[c]
−
* [[3.4.21.102-RXN]]
+
 
−
* [[3.4.23.1-RXN]]
+
== Genes associated with this reaction  ==
−
* [[3.4.22.1-RXN]]
+
== Pathways  ==
−
* [[3.4.21.26-RXN]]
+
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
−
* [[3.4.22.15-RXN]]
+
** '''28''' reactions found over '''31''' reactions in the full pathway
−
* [[3.4.21.53-RXN]]
+
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
−
* [[3.4.21.4-RXN]]
+
** '''20''' reactions found over '''31''' reactions in the full pathway
−
== Reaction(s) known to produce the compound ==
+
== Reconstruction information  ==
−
== Reaction(s) of unknown directionality ==
+
* Category: [[gap-filling]]
−
* [[RXN0-1061]]
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
* [[ARGINYLTRANSFERASE-RXN]]
+
*** Tool: [[meneco]]
−
* [[DISULISOM-RXN]]
+
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=a protein}}
+
* LIGAND-RXN:
−
{{#set: consumed by=3.4.25.1-RXN|3.4.23.34-RXN|3.4.21.92-RXN|3.4.22.16-RXN|3.4.21.102-RXN|3.4.23.1-RXN|3.4.22.1-RXN|3.4.21.26-RXN|3.4.22.15-RXN|3.4.21.53-RXN|3.4.21.4-RXN}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04462 R04462]
−
{{#set: consumed or produced by=RXN0-1061|ARGINYLTRANSFERASE-RXN|DISULISOM-RXN}}
+
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P49327 P49327]
 +
** [http://www.uniprot.org/uniprot/P07149 P07149]
 +
** [http://www.uniprot.org/uniprot/P12276 P12276]
 +
** [http://www.uniprot.org/uniprot/P12785 P12785]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-2.3.1.86}}
 +
{{#set: ec number=EC-2.3.1.85}}
 +
{{#set: ec number=EC-4.2.1.59}}
 +
{{#set: common name=D-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase|β-hydroxypalmitoyl-acyl carrier protein dehydrase|β-hydroxypalmitoyl thioester dehydratase|β-hydroxypalmityl-ACP dehydrase|(3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase|(3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase (hexadec-2-enoyl-[acyl-carrier protein]-forming)}}
 +
{{#set: in pathway=PWY-5971|PWY-5994}}
 +
{{#set: reconstruction category=gap-filling}}
 +
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
 +
{{#set: reconstruction tool=meneco}}
 +
{{#set: reconstruction comment=added for gapfilling}}

Revision as of 21:11, 17 March 2018

Reaction 4.2.1.61-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):
    • D-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase
    • β-hydroxypalmitoyl-acyl carrier protein dehydrase
    • β-hydroxypalmitoyl thioester dehydratase
    • β-hydroxypalmityl-ACP dehydrase
    • (3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase
    • (3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase (hexadec-2-enoyl-[acyl-carrier protein]-forming)

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
    • 28 reactions found over 31 reactions in the full pathway
  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 20 reactions found over 31 reactions in the full pathway

Reconstruction information

External links



  • "D-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase" cannot be used as a page name in this wiki.
  • "(3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase" cannot be used as a page name in this wiki.
  • "(3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase (hexadec-2-enoyl-[acyl-carrier protein]-forming)" cannot be used as a page name in this wiki.



Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD-2961&oldid=12007"