Difference between revisions of "METOH"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.99.1.2-RXN 5.99.1.2-RXN] == * direction: ** REVERSIBLE * common name: ** DNA topoisomerase ** DNA...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6549 PWY-6549] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-31...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.99.1.2-RXN 5.99.1.2-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6549 PWY-6549] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
 
* common name:
 
* common name:
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** DNA topoisomerase
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** L-glutamine biosynthesis III
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** DNA topoisomerase type I
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** Spo11/DNA topoisomerase VI subunit A
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* ec number:
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** [http://enzyme.expasy.org/EC/5.99.1.2 EC-5.99.1.2]
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* Synonym(s):
 
* Synonym(s):
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** L-glutamine biosynthesis (nitrogen remobilization from senescing leaves)
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''8''' reactions found over '''9''' reactions in the full pathway
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** 1 [[Negatively-super-coiled-DNAs]][c] '''<=>''' 1 [[Relaxed-DNAs]][c]
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* [[ACONITATEDEHYDR-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 a negatively supercoiled DNA[c] '''<=>''' 1 a relaxed DNA[c]
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*** [[Ec-16_001000]]
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*** [[Ec-12_000170]]
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== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-esiliculosus_genome]]
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* [[Ec-24_003570]]
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* [[ACONITATEHYDR-RXN]]
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** ESILICULOSUS_GENOME
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** 2 associated gene(s):
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***AUTOMATED-NAME-MATCH
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*** [[Ec-12_000170]]
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* [[Ec-01_011320]]
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*** [[Ec-16_001000]]
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** ESILICULOSUS_GENOME
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** 1 reconstruction source(s) associated:
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***GO-TERM
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*** [[annotation-esiliculosus_genome]]
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* [[Ec-15_001600]]
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* [[CITSYN-RXN]]
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** ESILICULOSUS_GENOME
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** 0 associated gene:
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***GO-TERM
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** 1 reconstruction source(s) associated:
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* [[Ec-03_004560]]
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*** [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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* [[GLUTAMATE-SYNTHASE-FERREDOXIN-RXN]]
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***AUTOMATED-NAME-MATCH
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** 3 associated gene(s):
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* [[Ec-12_007190]]
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*** [[Ec-26_004630]]
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** ESILICULOSUS_GENOME
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*** [[Ec-00_000720]]
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***GO-TERM
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*** [[Ec-27_004970]]
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* [[Ec-08_003340]]
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** 2 reconstruction source(s) associated:
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** ESILICULOSUS_GENOME
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*** [[annotation-esiliculosus_genome]]
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***GO-TERM
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*** [[orthology-aragem]]
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* [[Ec-03_001530]]
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* [[GLUTAMINESYN-RXN]]
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** ESILICULOSUS_GENOME
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** 4 associated gene(s):
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***GO-TERM
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*** [[Ec-15_004110]]
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* [[Ec-01_011310]]
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*** [[Ec-21_003610]]
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** ESILICULOSUS_GENOME
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*** [[Ec-09_000640]]
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***GO-TERM
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*** [[Ec-15_004120]]
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* [[Ec-12_007130]]
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** 2 reconstruction source(s) associated:
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** ESILICULOSUS_GENOME
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*** [[annotation-esiliculosus_genome]]
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***GO-TERM
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*** [[orthology-aragem]]
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== Pathways  ==
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* [[ISOCITDEH-RXN]]
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== Reconstruction information  ==
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** 1 associated gene(s):
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* [[annotation]]:
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*** [[Ec-11_003080]]
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** [[pathwaytools]]:
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** 1 reconstruction source(s) associated:
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*** [[esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
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* [[PEPCARBOX-RXN]]
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** 1 associated gene(s):
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*** [[Ec-28_003470]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN]]
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** 1 associated gene(s):
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*** [[Ec-18_001310]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=ISOCITRATE-DEHYDROGENASE-NAD+-RXN ISOCITRATE-DEHYDROGENASE-NAD+-RXN]
 
== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: taxonomic range=TAX-3193}}
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** [http://www.uniprot.org/uniprot/Q7M0H8 Q7M0H8]
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{{#set: common name=L-glutamine biosynthesis III}}
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** [http://www.uniprot.org/uniprot/Q07050 Q07050]
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{{#set: common name=L-glutamine biosynthesis (nitrogen remobilization from senescing leaves)}}
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** [http://www.uniprot.org/uniprot/Q9JWZ5 Q9JWZ5]
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{{#set: reaction found=8}}
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** [http://www.uniprot.org/uniprot/Q59046 Q59046]
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{{#set: total reaction=9}}
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** [http://www.uniprot.org/uniprot/Q9PLZ2 Q9PLZ2]
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{{#set: completion rate=89.0}}
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** [http://www.uniprot.org/uniprot/P47368 P47368]
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** [http://www.uniprot.org/uniprot/Q9CG80 Q9CG80]
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** [http://www.uniprot.org/uniprot/P43704 P43704]
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** [http://www.uniprot.org/uniprot/P43012 P43012]
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** [http://www.uniprot.org/uniprot/P0A620 P0A620]
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** [http://www.uniprot.org/uniprot/P04786 P04786]
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** [http://www.uniprot.org/uniprot/P13099 P13099]
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** [http://www.uniprot.org/uniprot/P06612 P06612]
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** [http://www.uniprot.org/uniprot/P11387 P11387]
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** [http://www.uniprot.org/uniprot/P07799 P07799]
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** [http://www.uniprot.org/uniprot/P93119 P93119]
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** [http://www.uniprot.org/uniprot/O13463 O13463]
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** [http://www.uniprot.org/uniprot/Q94705 Q94705]
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** [http://www.uniprot.org/uniprot/Q04750 Q04750]
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** [http://www.uniprot.org/uniprot/P14294 P14294]
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** [http://www.uniprot.org/uniprot/P30181 P30181]
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** [http://www.uniprot.org/uniprot/P34185 P34185]
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** [http://www.uniprot.org/uniprot/P30189 P30189]
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** [http://www.uniprot.org/uniprot/P40114 P40114]
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** [http://www.uniprot.org/uniprot/P41511 P41511]
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** [http://www.uniprot.org/uniprot/Q8I3Z9 Q8I3Z9]
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** [http://www.uniprot.org/uniprot/Q26024 Q26024]
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** [http://www.uniprot.org/uniprot/Q27529 Q27529]
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** [http://www.uniprot.org/uniprot/P41512 P41512]
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** [http://www.uniprot.org/uniprot/O24307 O24307]
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** [http://www.uniprot.org/uniprot/P71196 P71196]
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** [http://www.uniprot.org/uniprot/O70157 O70157]
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** [http://www.uniprot.org/uniprot/O60126 O60126]
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** [http://www.uniprot.org/uniprot/O61660 O61660]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=DNA topoisomerase}}
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{{#set: common name=DNA topoisomerase type I}}
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{{#set: common name=Spo11/DNA topoisomerase VI subunit A}}
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{{#set: ec number=EC-5.99.1.2}}
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{{#set: gene associated=Ec-24_003570|Ec-01_011320|Ec-15_001600|Ec-03_004560|Ec-12_007190|Ec-08_003340|Ec-03_001530|Ec-01_011310|Ec-12_007130}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 21:12, 17 March 2018

Pathway PWY-6549

  • taxonomic range:
  • common name:
    • L-glutamine biosynthesis III
  • Synonym(s):
    • L-glutamine biosynthesis (nitrogen remobilization from senescing leaves)

Reaction(s) found

8 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=METOH&oldid=12082"