Difference between revisions of "Ec-27 004830"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15635 RXN-15635] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-methyl-2-oxobutanoate hyd...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7385 PWY-7385] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15635 RXN-15635] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7385 PWY-7385] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** 3-methyl-2-oxobutanoate hydroxymethyltransferase
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** 1,3-propanediol biosynthesis (engineered)
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* ec number:
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** [http://enzyme.expasy.org/EC/2.1.2.11 EC-2.1.2.11]
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* Synonym(s):
 
* Synonym(s):
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** 1,3-PDO biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''5''' reactions found over '''9''' reactions in the full pathway
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** 1 [[METHYLENETETRAHYDROMETHANOPTERIN]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[2-KETO-ISOVALERATE]][c] '''=>''' 1 [[THMPT]][c] '''+''' 1 [[2-DEHYDROPANTOATE]][c]
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* [[1.1.1.8-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 5,10-methylene-tetrahydromethanopterin[c] '''+''' 1 H2O[c] '''+''' 1 3-methyl-2-oxobutanoate[c] '''=>''' 1 tetrahydromethanopterin[c] '''+''' 1 2-dehydropantoate[c]
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*** [[Ec-27_006990]]
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*** [[Ec-19_001930]]
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== Genes associated with this reaction  ==
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*** [[Ec-19_004200]]
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Genes have been associated with this reaction based on different elements listed below.
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** 1 reconstruction source(s) associated:
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* [[Ec-01_001700]]
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*** [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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* [[6PFRUCTPHOS-RXN]]
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***GO-TERM
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** 3 associated gene(s):
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== Pathways  ==
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*** [[Ec-12_002540]]
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* [[PWY-6654]], phosphopantothenate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6654 PWY-6654]
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*** [[Ec-22_000070]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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*** [[Ec-14_003880]]
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== Reconstruction information  ==
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** 2 reconstruction source(s) associated:
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* [[annotation]]:
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*** [[annotation-esiliculosus_genome]]
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** [[pathwaytools]]:
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*** [[orthology-aragem]]
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*** [[esiliculosus_genome]]
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* [[F16ALDOLASE-RXN]]
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** 4 associated gene(s):
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*** [[Ec-10_000880]]
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*** [[Ec-10_004980]]
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*** [[Ec-14_001680]]
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*** [[Ec-01_008040]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[GLUCOKIN-RXN]]
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** 1 associated gene(s):
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*** [[Ec-27_005030]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[PGLUCISOM-RXN]]
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** 3 associated gene(s):
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*** [[Ec-24_002470]]
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*** [[Ec-13_003530]]
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*** [[Ec-13_003810]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=GLYCEROL-DEHYDRATASE-RXN GLYCEROL-DEHYDRATASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14965 RXN-14965]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6487 RXN0-6487]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-7077 RXN0-7077]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-4751}}
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{{#set: common name=3-methyl-2-oxobutanoate hydroxymethyltransferase}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: ec number=EC-2.1.2.11}}
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{{#set: common name=1,3-propanediol biosynthesis (engineered)}}
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{{#set: gene associated=Ec-01_001700}}
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{{#set: common name=1,3-PDO biosynthesis}}
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{{#set: in pathway=PWY-6654}}
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{{#set: reaction found=5}}
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{{#set: reconstruction category=annotation}}
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{{#set: total reaction=9}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: completion rate=56.0}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 22:13, 17 March 2018

Pathway PWY-7385

  • taxonomic range:
  • common name:
    • 1,3-propanediol biosynthesis (engineered)
  • Synonym(s):
    • 1,3-PDO biosynthesis

Reaction(s) found

5 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-27_004830&oldid=12145"