Difference between revisions of "Ec-17 001590"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GCVP-RXN GCVP-RXN] == * direction: ** REVERSIBLE * common name: ** glycine dehydrogenase (decarboxy...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-161 RXN1F-161] == * direction: ** LEFT-TO-RIGHT * common name: ** GA12-aldehyde monooxygenase...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GCVP-RXN GCVP-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-161 RXN1F-161] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** glycine dehydrogenase (decarboxylating)
+
** GA12-aldehyde monooxygenase
−
** Glycine dehydrogenase (decarboxylating)
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.4.4.2 EC-1.4.4.2]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[GLY]][c] '''+''' 1 [[PROTEIN-LIPOYLLYSINE]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[AMINOMETHYLDIHYDROLIPOYL-GCVH]][c]
+
** 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD1F-138]][c] '''=>''' 1 [[CPD1F-95]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 glycine[c] '''+''' 1 a [glycine-cleavage complex H protein] N6-lipoyl-L-lysine[c] '''<=>''' 1 CO2[c] '''+''' 1 a [glycine-cleavage complex H protein] N6-aminomethyldihydrolipoyl-L-lysine[c]
+
** 1 NADPH[c] '''+''' 1 oxygen[c] '''+''' 1 gibberellin A12-aldehyde[c] '''=>''' 1 gibberellin A12[c] '''+''' 1 NADP+[c] '''+''' 1 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-23_004150]]
+
* [[Ec-10_006240]]
−
** ESILICULOSUS_GENOME
+
** [[pantograph]]-[[aragem]]
−
***EC-NUMBER
+
* [[Ec-00_005820]]
−
* [[Ec-07_004110]]
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** [[pantograph]]-[[aragem]]
−
** ESILICULOSUS_GENOME
+
* [[Ec-00_005850]]
−
***GO-TERM
+
** [[pantograph]]-[[aragem]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[GLYCINE-SYN2-PWY]], glycine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=GLYCINE-SYN2-PWY GLYCINE-SYN2-PWY]
+
* [[PWY-5047]], gibberellin biosynthesis IV (Gibberella fujikuroi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5047 PWY-5047]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''15''' reactions in the full pathway
−
* [[GLYCLEAV-PWY]], glycine cleavage: [http://metacyc.org/META/NEW-IMAGE?object=GLYCLEAV-PWY GLYCLEAV-PWY]
+
* [[PWY-5034]], GA12 biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5034 PWY-5034]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-aragem]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22700 22700]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03425 R03425]
+
** [http://www.genome.jp/dbget-bin/www_bget?R06297 R06297]
−
* UNIPROT:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.uniprot.org/uniprot/P26969 P26969]
+
{{#set: common name=GA12-aldehyde monooxygenase}}
−
** [http://www.uniprot.org/uniprot/Q9UXT1 Q9UXT1]
+
{{#set: gene associated=Ec-10_006240|Ec-00_005820|Ec-00_005850}}
−
** [http://www.uniprot.org/uniprot/Q9JT86 Q9JT86]
+
{{#set: in pathway=PWY-5047|PWY-5034}}
−
** [http://www.uniprot.org/uniprot/Q9UXT0 Q9UXT0]
+
{{#set: reconstruction category=orthology}}
−
** [http://www.uniprot.org/uniprot/P23378 P23378]
+
{{#set: reconstruction source=orthology-aragem}}
−
** [http://www.uniprot.org/uniprot/P33195 P33195]
+
{{#set: reconstruction tool=pantograph}}
−
** [http://www.uniprot.org/uniprot/O80988 O80988]
+
−
** [http://www.uniprot.org/uniprot/Q94B78 Q94B78]
+
−
** [http://www.uniprot.org/uniprot/O32915 O32915]
+
−
** [http://www.uniprot.org/uniprot/O22575 O22575]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=glycine dehydrogenase (decarboxylating)}}
+
−
{{#set: common name=Glycine dehydrogenase (decarboxylating)}}
+
−
{{#set: ec number=EC-1.4.4.2}}
+
−
{{#set: gene associated=Ec-23_004150|Ec-07_004110}}
+
−
{{#set: in pathway=GLYCINE-SYN2-PWY|GLYCLEAV-PWY}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Revision as of 21:14, 17 March 2018

Reaction RXN1F-161

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • GA12-aldehyde monooxygenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADPH[c] + 1 oxygen[c] + 1 gibberellin A12-aldehyde[c] => 1 gibberellin A12[c] + 1 NADP+[c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5047, gibberellin biosynthesis IV (Gibberella fujikuroi): PWY-5047
    • 3 reactions found over 15 reactions in the full pathway
  • PWY-5034, GA12 biosynthesis: PWY-5034
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-17_001590&oldid=12204"