Difference between revisions of "Ec-04 002070"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6PGLUCONOLACT-RXN 6PGLUCONOLACT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 6-Phosphogl...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6890 PWY-6890] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6PGLUCONOLACT-RXN 6PGLUCONOLACT-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6890 PWY-6890] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33630 TAX-33630]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** 6-Phosphogluconolactonase
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** 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.1.31 EC-3.1.1.31]
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* Synonym(s):
 
* Synonym(s):
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** HMP-PP biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''2''' reactions in the full pathway
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** 1 [[WATER]][c] '''+''' 1 [[D-6-P-GLUCONO-DELTA-LACTONE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-2961]][c]
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* [[PYRIMSYN3-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 H2O[c] '''+''' 1 6-phospho D-glucono-1,5-lactone[c] '''=>''' 1 H+[c] '''+''' 1 D-gluconate 6-phosphate[c]
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*** [[Ec-06_006870]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-aragem]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) not found ==
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* [[Ec-02_004960]]
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* [http://metacyc.org/META/NEW-IMAGE?object=PYRIMSYN1-RXN PYRIMSYN1-RXN]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
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** '''13''' reactions found over '''18''' reactions in the full pathway
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* [[RUMP-PWY]], formaldehyde oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=RUMP-PWY RUMP-PWY]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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* [[OXIDATIVEPENT-PWY]], pentose phosphate pathway (oxidative branch): [http://metacyc.org/META/NEW-IMAGE?object=OXIDATIVEPENT-PWY OXIDATIVEPENT-PWY]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[GLYCOLYSIS-E-D]], superpathway of glycolysis and Entner-Doudoroff: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS-E-D GLYCOLYSIS-E-D]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[aragem]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12556 12556]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6890 PWY-6890]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02035 R02035]
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{{#set: taxonomic range=TAX-33090}}
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* UNIPROT:
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{{#set: taxonomic range=TAX-33630}}
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** [http://www.uniprot.org/uniprot/P63337 P63337]
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{{#set: taxonomic range=TAX-2157}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=6-Phosphogluconolactonase}}
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{{#set: common name=4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis}}
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{{#set: ec number=EC-3.1.1.31}}
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{{#set: common name=HMP-PP biosynthesis}}
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{{#set: gene associated=Ec-02_004960}}
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{{#set: reaction found=1}}
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{{#set: in pathway=P122-PWY|RUMP-PWY|OXIDATIVEPENT-PWY|GLYCOLYSIS-E-D}}
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{{#set: total reaction=2}}
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{{#set: reconstruction category=orthology}}
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{{#set: completion rate=50.0}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aragem}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 21:15, 17 March 2018

Pathway PWY-6890

Reaction(s) found

1 reactions found over 2 reactions in the full pathway

Reaction(s) not found

External links






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