Difference between revisions of "Ec-00 007000"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CARBOXYPEPTIDASE-A-RXN CARBOXYPEPTIDASE-A-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** o...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNN-404 RXNN-404] == * direction: ** LEFT-TO-RIGHT * common name: ** Amidase * ec number: ** [http...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CARBOXYPEPTIDASE-A-RXN CARBOXYPEPTIDASE-A-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNN-404 RXNN-404] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** obsolete carboxypeptidase A
+
** Amidase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.4.17.1 EC-3.4.17.1]
+
** [http://enzyme.expasy.org/EC/3.5.1.4 EC-3.5.1.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[Peptides-holder]][c] '''=>''' 1 [[L-Amino-Acids]][c] '''+''' 1 [[Peptides-holder]][c]
+
** 1 [[CPD-237]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[INDOLE_ACETATE_AUXIN]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 a peptide[c] '''=>''' 1 an L-amino acid[c] '''+''' 1 a peptide[c]
+
** 1 indole-3-acetamide[c] '''+''' 1 H2O[c] '''=>''' 1 ammonium[c] '''+''' 1 indole-3-acetate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-14_005250]]
+
* [[Ec-06_009020]]
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
−
***GO-TERM
+
***AUTOMATED-NAME-MATCH
−
* [[Ec-00_003690]]
+
* [[Ec-02_005910]]
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
−
***GO-TERM
+
***AUTOMATED-NAME-MATCH
−
* [[Ec-24_002450]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-24_000110]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-581]], indole-3-acetate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-581 PWY-581]
 +
** '''2''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY-5025]], indole-3-acetate biosynthesis IV (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5025 PWY-5025]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-3161]], indole-3-acetate biosynthesis III (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3161 PWY-3161]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* RHEA:
−
** [http://www.uniprot.org/uniprot/P09954 P09954]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34371 34371]
−
** [http://www.uniprot.org/uniprot/P15089 P15089]
+
* LIGAND-RXN:
−
** [http://www.uniprot.org/uniprot/P15088 P15088]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03096 R03096]
−
** [http://www.uniprot.org/uniprot/P00730 P00730]
+
−
** [http://www.uniprot.org/uniprot/P00731 P00731]
+
−
** [http://www.uniprot.org/uniprot/P15085 P15085]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=obsolete carboxypeptidase A}}
+
{{#set: common name=Amidase}}
−
{{#set: ec number=EC-3.4.17.1}}
+
{{#set: ec number=EC-3.5.1.4}}
−
{{#set: gene associated=Ec-14_005250|Ec-00_003690|Ec-24_002450|Ec-24_000110}}
+
{{#set: gene associated=Ec-06_009020|Ec-02_005910}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=PWY-581|PWY-5025|PWY-3161}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Revision as of 21:17, 17 March 2018

Reaction RXNN-404

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Amidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-581, indole-3-acetate biosynthesis II: PWY-581
    • 2 reactions found over 14 reactions in the full pathway
  • PWY-5025, indole-3-acetate biosynthesis IV (bacteria): PWY-5025
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-3161, indole-3-acetate biosynthesis III (bacteria): PWY-3161
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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