Difference between revisions of "IGPSYN-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PREPHENATE-DEHYDROGENASE-NADP+-RXN PREPHENATE-DEHYDROGENASE-NADP+-RXN] == * direction: ** REVERSIBL...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7828 RXN-7828] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PREPHENATE-DEHYDROGENASE-NADP+-RXN PREPHENATE-DEHYDROGENASE-NADP+-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7828 RXN-7828] ==
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/1.3.1.13 EC-1.3.1.13]
+
** [http://enzyme.expasy.org/EC/2.4.1 EC-2.4.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[NADP]][c] '''+''' 1 [[PREPHENATE]][c] '''<=>''' 1 [[P-HYDROXY-PHENYLPYRUVATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADPH]][c]
+
** 1 [[PELARGONIDIN-3-GLUCOSIDE-CMPD]][c] '''+''' 1 [[CPD-12575]][c] '''=>''' 1 [[CPD-7137]][c] '''+''' 1 [[UDP]][c]
 
* With common name(s):
 
* With common name(s):
** 1 NADP+[c] '''+''' 1 prephenate[c] '''<=>''' 1 4-hydroxyphenylpyruvate[c] '''+''' 1 CO2[c] '''+''' 1 NADPH[c]
+
** 1 pelargonidin-3-O-&beta;-D-glucoside[c] '''+''' 1 UDP-&alpha;-D-glucose[c] '''=>''' 1 pelargonidin-3,5-di-O-&beta;-D-glucoside[c] '''+''' 1 UDP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Ec-28_003310]]
 +
** [[pantograph]]-[[aragem]]
 +
* [[Ec-14_000870]]
 +
** [[pantograph]]-[[aragem]]
 +
* [[Ec-04_004610]]
 +
** [[pantograph]]-[[aragem]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-5268]], salvianin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5268 PWY-5268]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5139]], pelargonidin conjugates biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5139 PWY-5139]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[gap-filling]]:
+
* Category: [[orthology]]
** [[meneco]]:
+
** Source: [[orthology-aragem]]
*** [[added for gapfilling]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
+
{{#set: direction=LEFT-TO-RIGHT}}
** [http://www.genome.jp/dbget-bin/www_bget?R01730 R01730]
+
{{#set: ec number=EC-2.4.1}}
* UNIPROT:
+
{{#set: gene associated=Ec-28_003310|Ec-14_000870|Ec-04_004610}}
** [http://www.uniprot.org/uniprot/P20049 P20049]
+
{{#set: in pathway=PWY-5268|PWY-5139}}
{{#set: direction=REVERSIBLE}}
+
{{#set: reconstruction category=orthology}}
{{#set: ec number=EC-1.3.1.13}}
+
{{#set: reconstruction source=orthology-aragem}}
{{#set: in pathway=}}
+
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction category=gap-filling}}
+
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction source=added for gapfilling}}
+

Revision as of 21:17, 17 March 2018

Reaction RXN-7828

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5268, salvianin biosynthesis: PWY-5268
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-5139, pelargonidin conjugates biosynthesis: PWY-5139
    • 1 reactions found over 6 reactions in the full pathway

Reconstruction information

External links