Difference between revisions of "ITACONATE"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Glycoprotein-Asn-oligosaccharides Glycoprotein-Asn-oligosaccharides] == * common name: ** a [gl...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1TRANSKETO-RXN 1TRANSKETO-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy....") |
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− | [[Category: | + | [[Category:Reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1TRANSKETO-RXN 1TRANSKETO-RXN] == |
− | * | + | * direction: |
− | ** | + | ** REVERSIBLE |
+ | * ec number: | ||
+ | ** [http://enzyme.expasy.org/EC/2.2.1.1 EC-2.2.1.1] | ||
* Synonym(s): | * Synonym(s): | ||
− | == Reaction(s) | + | == Reaction Formula == |
− | == | + | * With identifiers: |
− | == | + | ** 1 [[D-SEDOHEPTULOSE-7-P]][c] '''+''' 1 [[GAP]][c] '''<=>''' 1 [[RIBOSE-5P]][c] '''+''' 1 [[XYLULOSE-5-PHOSPHATE]][c] |
− | * [[ | + | * With common name(s): |
+ | ** 1 D-sedoheptulose 7-phosphate[c] '''+''' 1 D-glyceraldehyde 3-phosphate[c] '''<=>''' 1 D-ribose 5-phosphate[c] '''+''' 1 D-xylulose 5-phosphate[c] | ||
+ | |||
+ | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * [[Ec-20_002600]] | ||
+ | ** [[pantograph]]-[[aragem]] | ||
+ | ** [[pantograph]]-[[aragem]] | ||
+ | == Pathways == | ||
+ | * [[P124-PWY]], Bifidobacterium shunt: [http://metacyc.org/META/NEW-IMAGE?object=P124-PWY P124-PWY] | ||
+ | ** '''12''' reactions found over '''15''' reactions in the full pathway | ||
+ | * [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY] | ||
+ | ** '''13''' reactions found over '''13''' reactions in the full pathway | ||
+ | * [[P21-PWY]], pentose phosphate pathway (partial): [http://metacyc.org/META/NEW-IMAGE?object=P21-PWY P21-PWY] | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-5723]], Rubisco shunt: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723] | ||
+ | ** '''10''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[PWY-1861]], formaldehyde assimilation II (RuMP Cycle): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1861 PWY-1861] | ||
+ | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[P185-PWY]], formaldehyde assimilation III (dihydroxyacetone cycle): [http://metacyc.org/META/NEW-IMAGE?object=P185-PWY P185-PWY] | ||
+ | ** '''11''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[NONOXIPENT-PWY]], pentose phosphate pathway (non-oxidative branch): [http://metacyc.org/META/NEW-IMAGE?object=NONOXIPENT-PWY NONOXIPENT-PWY] | ||
+ | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * Category: [[orthology]] | ||
+ | ** Source: [[orthology-aragem]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | * Category: [[annotation]] | ||
+ | ** Source: [[annotation-esiliculosus_genome]] | ||
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
− | {{#set: | + | * RHEA: |
− | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10508 10508] |
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R01641 R01641] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P29401 P29401] | ||
+ | ** [http://www.uniprot.org/uniprot/P33570 P33570] | ||
+ | ** [http://www.uniprot.org/uniprot/P21725 P21725] | ||
+ | ** [http://www.uniprot.org/uniprot/Q58094 Q58094] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JTR1 Q9JTR1] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CF56 Q9CF56] | ||
+ | ** [http://www.uniprot.org/uniprot/P21726 P21726] | ||
+ | ** [http://www.uniprot.org/uniprot/P47312 P47312] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PM31 Q9PM31] | ||
+ | ** [http://www.uniprot.org/uniprot/P43757 P43757] | ||
+ | ** [http://www.uniprot.org/uniprot/Q58092 Q58092] | ||
+ | ** [http://www.uniprot.org/uniprot/P45694 P45694] | ||
+ | ** [http://www.uniprot.org/uniprot/Q52723 Q52723] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9Z475 Q9Z475] | ||
+ | ** [http://www.uniprot.org/uniprot/P34736 P34736] | ||
+ | ** [http://www.uniprot.org/uniprot/P33315 P33315] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42675 Q42675] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42676 Q42676] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42677 Q42677] | ||
+ | ** [http://www.uniprot.org/uniprot/P46708 P46708] | ||
+ | ** [http://www.uniprot.org/uniprot/P75611 P75611] | ||
+ | ** [http://www.uniprot.org/uniprot/P73282 P73282] | ||
+ | ** [http://www.uniprot.org/uniprot/Q49047 Q49047] | ||
+ | ** [http://www.uniprot.org/uniprot/O20250 O20250] | ||
+ | ** [http://www.uniprot.org/uniprot/O78327 O78327] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9URM2 Q9URM2] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9RFB7 Q9RFB7] | ||
+ | ** [http://www.uniprot.org/uniprot/P23254 P23254] | ||
+ | ** [http://www.uniprot.org/uniprot/P27302 P27302] | ||
+ | ** [http://www.uniprot.org/uniprot/P29277 P29277] | ||
+ | ** [http://www.uniprot.org/uniprot/P22976 P22976] | ||
+ | {{#set: direction=REVERSIBLE}} | ||
+ | {{#set: ec number=EC-2.2.1.1}} | ||
+ | {{#set: gene associated=Ec-20_002600}} | ||
+ | {{#set: in pathway=P124-PWY|CALVIN-PWY|P21-PWY|PWY-5723|PWY-1861|P185-PWY|NONOXIPENT-PWY}} | ||
+ | {{#set: reconstruction category=orthology|annotation}} | ||
+ | {{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Revision as of 21:18, 17 March 2018
Contents
Reaction 1TRANSKETO-RXN
- direction:
- REVERSIBLE
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 D-SEDOHEPTULOSE-7-P[c] + 1 GAP[c] <=> 1 RIBOSE-5P[c] + 1 XYLULOSE-5-PHOSPHATE[c]
- With common name(s):
- 1 D-sedoheptulose 7-phosphate[c] + 1 D-glyceraldehyde 3-phosphate[c] <=> 1 D-ribose 5-phosphate[c] + 1 D-xylulose 5-phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
- P124-PWY, Bifidobacterium shunt: P124-PWY
- 12 reactions found over 15 reactions in the full pathway
- CALVIN-PWY, Calvin-Benson-Bassham cycle: CALVIN-PWY
- 13 reactions found over 13 reactions in the full pathway
- P21-PWY, pentose phosphate pathway (partial): P21-PWY
- 3 reactions found over 3 reactions in the full pathway
- PWY-5723, Rubisco shunt: PWY-5723
- 10 reactions found over 10 reactions in the full pathway
- PWY-1861, formaldehyde assimilation II (RuMP Cycle): PWY-1861
- 7 reactions found over 9 reactions in the full pathway
- P185-PWY, formaldehyde assimilation III (dihydroxyacetone cycle): P185-PWY
- 11 reactions found over 12 reactions in the full pathway
- NONOXIPENT-PWY, pentose phosphate pathway (non-oxidative branch): NONOXIPENT-PWY
- 5 reactions found over 5 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-aragem
- Tool: pantograph
- Source: orthology-aragem
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: