Difference between revisions of "Ec-28 003310"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FPPSYN-RXN FPPSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Prenyltransferase/squalen...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13937 CPD-13937] == * smiles: ** CC(=O)NC1(C(OC(CO)C(C(O)1)OC2(OC(CO)C(C(O)C(NC(=O)C)2)OC3(...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FPPSYN-RXN FPPSYN-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13937 CPD-13937] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC(=O)NC1(C(OC(CO)C(C(O)1)OC2(OC(CO)C(C(O)C(NC(=O)C)2)OC3(C(O)C(C(O)C(O3)COC6(C(O)C(C(O)C(COC5(OC(CO)C(O)C(O)C(OC4(C(O)C(O)C(O)C(CO)O4))5))O6)OC7(C(C(O)C(O)C(CO)O7)OC8(C(O)C(O)C(O)C(CO)O8))))OC%13(OC(CO)C(O)C(O)C(OC%12(OC(CO)C(O)C(O)C(OC9(C(O)C(C(O)C(O9)CO)OC%10(C(O)C(C(O)C(O%10)CO)OC%11(OC(CO)C(O)C(O)C(O)%11))))%12))%13))))O)
 +
* inchi key:
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** InChIKey=WQOBEIJLPIXUTJ-RTIPJVFBSA-N
 
* common name:
 
* common name:
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** Prenyltransferase/squalene oxidase
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** Glc2Man9GlcNAc2
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** Farnesyl pyrophosphate synthase
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* molecular weight:
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* ec number:
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** 2207.966   
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** [http://enzyme.expasy.org/EC/2.5.1.10 EC-2.5.1.10]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[GERANYL-PP]][c] '''=>''' 1 [[FARNESYL-PP]][c] '''+''' 1 [[PPI]][c]
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* [[3.2.1.106-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 isopentenyl diphosphate[c] '''+''' 1 geranyl diphosphate[c] '''=>''' 1 (2E,6E)-farnesyl diphosphate[c] '''+''' 1 diphosphate[c]
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−
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-07_006170]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-10_003020]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-16_004330]]
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PWY-7736]], stellatic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7736 PWY-7736]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6859]], all-trans-farnesol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6859 PWY-6859]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5123]], trans, trans-farnesyl diphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5123 PWY-5123]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7721]], methyl phomopsenoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7721 PWY-7721]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7102]], bisabolene biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7102 PWY-7102]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[aragem]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19361 19361]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90657567 90657567]
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* LIGAND-RXN:
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{{#set: smiles=CC(=O)NC1(C(OC(CO)C(C(O)1)OC2(OC(CO)C(C(O)C(NC(=O)C)2)OC3(C(O)C(C(O)C(O3)COC6(C(O)C(C(O)C(COC5(OC(CO)C(O)C(O)C(OC4(C(O)C(O)C(O)C(CO)O4))5))O6)OC7(C(C(O)C(O)C(CO)O7)OC8(C(O)C(O)C(O)C(CO)O8))))OC%13(OC(CO)C(O)C(O)C(OC%12(OC(CO)C(O)C(O)C(OC9(C(O)C(C(O)C(O9)CO)OC%10(C(O)C(C(O)C(O%10)CO)OC%11(OC(CO)C(O)C(O)C(O)%11))))%12))%13))))O)}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02003 R02003]
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{{#set: inchi key=InChIKey=WQOBEIJLPIXUTJ-RTIPJVFBSA-N}}
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* UNIPROT:
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{{#set: common name=Glc2Man9GlcNAc2}}
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** [http://www.uniprot.org/uniprot/P08524 P08524]
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{{#set: molecular weight=2207.966    }}
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** [http://www.uniprot.org/uniprot/P05369 P05369]
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{{#set: produced by=3.2.1.106-RXN}}
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** [http://www.uniprot.org/uniprot/P14324 P14324]
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** [http://www.uniprot.org/uniprot/Q9CH81 Q9CH81]
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** [http://www.uniprot.org/uniprot/Q9PM32 Q9PM32]
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** [http://www.uniprot.org/uniprot/P45204 P45204]
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** [http://www.uniprot.org/uniprot/Q9JSM0 Q9JSM0]
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** [http://www.uniprot.org/uniprot/P49350 P49350]
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** [http://www.uniprot.org/uniprot/P22939 P22939]
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** [http://www.uniprot.org/uniprot/Q08291 Q08291]
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** [http://www.uniprot.org/uniprot/P49349 P49349]
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** [http://www.uniprot.org/uniprot/Q09152 Q09152]
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** [http://www.uniprot.org/uniprot/P49351 P49351]
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** [http://www.uniprot.org/uniprot/P49352 P49352]
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** [http://www.uniprot.org/uniprot/Q43315 Q43315]
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** [http://www.uniprot.org/uniprot/O24241 O24241]
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** [http://www.uniprot.org/uniprot/O24242 O24242]
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** [http://www.uniprot.org/uniprot/Q92334 Q92334]
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** [http://www.uniprot.org/uniprot/Q92218 Q92218]
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** [http://www.uniprot.org/uniprot/Q92235 Q92235]
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** [http://www.uniprot.org/uniprot/Q92250 Q92250]
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** [http://www.uniprot.org/uniprot/Q8L7F4 Q8L7F4]
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** [http://www.uniprot.org/uniprot/P49353 P49353]
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** [http://www.uniprot.org/uniprot/O04882 O04882]
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** [http://www.uniprot.org/uniprot/O65004 O65004]
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** [http://www.uniprot.org/uniprot/O14230 O14230]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Prenyltransferase/squalene oxidase}}
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{{#set: common name=Farnesyl pyrophosphate synthase}}
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{{#set: ec number=EC-2.5.1.10}}
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{{#set: gene associated=Ec-07_006170|Ec-10_003020|Ec-16_004330}}
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{{#set: in pathway=PWY-7736|PWY-6859|PWY-5123|PWY-7721|PWY-7102}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aragem}}
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−
{{#set: reconstruction category=annotation}}
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−
{{#set: reconstruction tool=pathwaytools}}
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−
{{#set: reconstruction source=esiliculosus_genome}}
+

Revision as of 21:21, 17 March 2018

Metabolite CPD-13937

  • smiles:
    • CC(=O)NC1(C(OC(CO)C(C(O)1)OC2(OC(CO)C(C(O)C(NC(=O)C)2)OC3(C(O)C(C(O)C(O3)COC6(C(O)C(C(O)C(COC5(OC(CO)C(O)C(O)C(OC4(C(O)C(O)C(O)C(CO)O4))5))O6)OC7(C(C(O)C(O)C(CO)O7)OC8(C(O)C(O)C(O)C(CO)O8))))OC%13(OC(CO)C(O)C(O)C(OC%12(OC(CO)C(O)C(O)C(OC9(C(O)C(C(O)C(O9)CO)OC%10(C(O)C(C(O)C(O%10)CO)OC%11(OC(CO)C(O)C(O)C(O)%11))))%12))%13))))O)
  • inchi key:
    • InChIKey=WQOBEIJLPIXUTJ-RTIPJVFBSA-N
  • common name:
    • Glc2Man9GlcNAc2
  • molecular weight:
    • 2207.966
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC(=O)NC1(C(OC(CO)C(C(O)1)OC2(OC(CO)C(C(O)C(NC(=O)C)2)OC3(C(O)C(C(O)C(O3)COC6(C(O)C(C(O)C(COC5(OC(CO)C(O)C(O)C(OC4(C(O)C(O)C(O)C(CO)O4))5))O6)OC7(C(C(O)C(O)C(CO)O7)OC8(C(O)C(O)C(O)C(CO)O8))))OC%13(OC(CO)C(O)C(O)C(OC%12(OC(CO)C(O)C(O)C(OC9(C(O)C(C(O)C(O9)CO)OC%10(C(O)C(C(O)C(O%10)CO)OC%11(OC(CO)C(O)C(O)C(O)%11))))%12))%13))))O)" cannot be used as a page name in this wiki.



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