Difference between revisions of "Ec-04 004690"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GTP-CYCLOHYDRO-II-RXN GTP-CYCLOHYDRO-II-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** GTP...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.145-RXN 2.4.1.145-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Alpha-1,3-mannosyl-...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GTP-CYCLOHYDRO-II-RXN GTP-CYCLOHYDRO-II-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.145-RXN 2.4.1.145-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** GTP cyclohydrolase II
+
** Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase, family GT54
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.5.4.25 EC-3.5.4.25]
+
** [http://enzyme.expasy.org/EC/2.4.1.145 EC-2.4.1.145]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 3 [[WATER]][c] '''+''' 1 [[GTP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[DIAMINO-OH-PHOSPHORIBOSYLAMINO-PYR]][c] '''+''' 1 [[FORMATE]][c] '''+''' 2 [[PROTON]][c]
+
** 1 [[2-2-N-linked-Glycan]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''=>''' 1 [[UDP]][c] '''+''' 1 [[24-2-N-linked-Glycan]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 3 H2O[c] '''+''' 1 GTP[c] '''=>''' 1 diphosphate[c] '''+''' 1 2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one[c] '''+''' 1 formate[c] '''+''' 2 H+[c]
+
** 1 N4-{N-acetyl-β-D-glucosaminyl-(1,2)-α-D-mannosyl-(1,3)-[N-acetyl-β-D-glucosaminyl-(1,2)-α-D-mannosyl-(1,6)]-β-D-mannosyl-(1,4)-N-acetyl-β-D-glucosaminyl-(1,4)-N-acetyl-β-D-glucosaminyl}-protein-L-asparagine[c] '''+''' 1 UDP-N-acetyl-α-D-glucosamine[c] '''=>''' 1 UDP[c] '''+''' 1 [(2,4),(2)]-N-linked glycan[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-02_005710]]
+
* [[Ec-07_006930]]
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
−
***GO-TERM
+
***EC-NUMBER
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-27_004040]]
+
−
** [[pantograph]]-[[aragem]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7539]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7539 PWY-7539]
+
* [[PWY-7426]], mannosyl-glycoprotein N-acetylglucosaminyltransferases: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7426 PWY-7426]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
+
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
−
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
+
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[aragem]]
+
*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00425 R00425]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P0A7I7 P0A7I7]
+
** [http://www.uniprot.org/uniprot/P23336 P23336]
−
** [http://www.uniprot.org/uniprot/Q9PNU4 Q9PNU4]
+
−
** [http://www.uniprot.org/uniprot/O08315 O08315]
+
−
** [http://www.uniprot.org/uniprot/O66679 O66679]
+
−
** [http://www.uniprot.org/uniprot/Q9PHU4 Q9PHU4]
+
−
** [http://www.uniprot.org/uniprot/O25484 O25484]
+
−
** [http://www.uniprot.org/uniprot/P0A5V0 P0A5V0]
+
−
** [http://www.uniprot.org/uniprot/P0A7I8 P0A7I8]
+
−
** [http://www.uniprot.org/uniprot/P43525 P43525]
+
−
** [http://www.uniprot.org/uniprot/P17620 P17620]
+
−
** [http://www.uniprot.org/uniprot/P38066 P38066]
+
−
** [http://www.uniprot.org/uniprot/P50139 P50139]
+
−
** [http://www.uniprot.org/uniprot/P74104 P74104]
+
−
** [http://www.uniprot.org/uniprot/O24019 O24019]
+
−
** [http://www.uniprot.org/uniprot/P51695 P51695]
+
−
** [http://www.uniprot.org/uniprot/P50855 P50855]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=GTP cyclohydrolase II}}
+
{{#set: common name=Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase, family GT54}}
−
{{#set: ec number=EC-3.5.4.25}}
+
{{#set: ec number=EC-2.4.1.145}}
−
{{#set: gene associated=Ec-02_005710|Ec-27_004040}}
+
{{#set: gene associated=Ec-07_006930}}
−
{{#set: in pathway=PWY-7539|PWY-6168|RIBOSYN2-PWY}}
+
{{#set: in pathway=PWY-7426}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=aragem}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Revision as of 21:25, 17 March 2018

Reaction 2.4.1.145-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase, family GT54
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 N4-{N-acetyl-β-D-glucosaminyl-(1,2)-α-D-mannosyl-(1,3)-[N-acetyl-β-D-glucosaminyl-(1,2)-α-D-mannosyl-(1,6)]-β-D-mannosyl-(1,4)-N-acetyl-β-D-glucosaminyl-(1,4)-N-acetyl-β-D-glucosaminyl}-protein-L-asparagine[c] + 1 UDP-N-acetyl-α-D-glucosamine[c] => 1 UDP[c] + 1 [(2,4),(2)]-N-linked glycan[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7426, mannosyl-glycoprotein N-acetylglucosaminyltransferases: PWY-7426
    • 7 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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