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| − | [[Category:Reaction]] | + | [[Category:Metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14971 RXN-14971] == | + | == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=tRNA-pseudouridine-38-40 tRNA-pseudouridine-38-40] == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| | * common name: | | * common name: |
| − | ** Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | + | ** a pseudouridine38-40 in tRNA |
| − | ** SDH1, succinate dehydrogenase subunit 1
| + | |
| − | ** SDH3, succinate dehydrogenase subunit 3
| + | |
| − | ** SDH2, succinate dehydrogenase subunit 2
| + | |
| − | ** SDH4, succinate dehydrogenase subunit 4
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/1.3.5.1 EC-1.3.5.1]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | + | ** a tRNA pseudouridine38-40 |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) known to consume the compound == |
| − | * With identifiers:
| + | == Reaction(s) known to produce the compound == |
| − | ** 1 [[SUC]][c] '''+''' 1 [[ETR-Quinones]][c] '''=>''' 1 [[FUM]][c] '''+''' 1 [[ETR-Quinols]][c]
| + | * [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]] |
| − | * With common name(s):
| + | == Reaction(s) of unknown directionality == |
| − | ** 1 succinate[c] '''+''' 1 an electron-transfer quinone[c] '''=>''' 1 fumarate[c] '''+''' 1 an electron-transfer quinol[c]
| + | |
| − | | + | |
| − | == Genes associated with this reaction == | + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Ec-11_000360]] | + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Ec-21_003470]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Ec-07_007310]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Ec-27_006560]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Ec-07_002870]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Ec-05_003640]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | == Pathways == | + | |
| − | * [[PWY-7254]], TCA cycle VII (acetate-producers): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7254 PWY-7254]
| + | |
| − | ** '''7''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | * [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase): [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY]
| + | |
| − | ** '''9''' reactions found over '''11''' reactions in the full pathway
| + | |
| − | * [[PWY-6969]], TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6969 PWY-6969]
| + | |
| − | ** '''10''' reactions found over '''12''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[esiliculosus_genome]]
| + | |
| | == External links == | | == External links == |
| − | {{#set: direction=LEFT-TO-RIGHT}}
| + | {{#set: common name=a pseudouridine38-40 in tRNA}} |
| − | {{#set: common name=Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain}} | + | {{#set: common name=a tRNA pseudouridine38-40}} |
| − | {{#set: common name=SDH1, succinate dehydrogenase subunit 1}} | + | {{#set: produced by=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN}} |
| − | {{#set: common name=SDH3, succinate dehydrogenase subunit 3}}
| + | |
| − | {{#set: common name=SDH2, succinate dehydrogenase subunit 2}}
| + | |
| − | {{#set: common name=SDH4, succinate dehydrogenase subunit 4}}
| + | |
| − | {{#set: ec number=EC-1.3.5.1}}
| + | |
| − | {{#set: gene associated=Ec-11_000360|Ec-21_003470|Ec-07_007310|Ec-27_006560|Ec-07_002870|Ec-05_003640}} | + | |
| − | {{#set: in pathway=PWY-7254|P105-PWY|PWY-6969}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=esiliculosus_genome}}
| + | |
