Difference between revisions of "TRNA-pseudouridine-38-40"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN] == * direction: **...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-804 CPD-804] == * smiles: ** C(CCC(O)CC(C([O-])=O)=O)([O-])=O * inchi key: ** InChIKey=HNOA...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-804 CPD-804] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(CCC(O)CC(C([O-])=O)=O)([O-])=O
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* inchi key:
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** InChIKey=HNOAJOYERZTSNK-BYPYZUCNSA-L
 
* common name:
 
* common name:
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** Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
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** (4S)-4-hydroxy-2-oxoheptanedioate
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/1.13.11.27 EC-1.13.11.27]
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** 188.137   
 
* Synonym(s):
 
* Synonym(s):
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** 4-hydroxy-2-ketoheptane-1,7-dioate
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** 2-oxo-4-hydroxyhepta-1,7-dioate
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** 4-hydroxy-2-oxo-heptanedioate
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** 4-hydroxy-2-ketopimelate
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** 2-keto-4-hydroxypimelate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN]]
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** 1 [[P-HYDROXY-PHENYLPYRUVATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[HOMOGENTISATE]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 4-hydroxyphenylpyruvate[c] '''+''' 1 oxygen[c] '''=>''' 1 CO2[c] '''+''' 1 homogentisate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-23_003630]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PWY-1581]], plastoquinol-9 biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1581 PWY-1581]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7432]], L-phenylalanine biosynthesis III (cytosolic, plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7432 PWY-7432]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[TYRFUMCAT-PWY]], L-tyrosine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=TYRFUMCAT-PWY TYRFUMCAT-PWY]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-1422]], vitamin E biosynthesis (tocopherols): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1422 PWY-1422]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[aragem]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16189 16189]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=23615324 23615324]
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* LIGAND-RXN:
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* CHEMSPIDER:
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** [http://www.genome.jp/dbget-bin/www_bget?R02521 R02521]
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** [http://www.chemspider.com/Chemical-Structure.19951289.html 19951289]
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* UNIPROT:
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P32754 P32754]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=73036 73036]
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** [http://www.uniprot.org/uniprot/Q02110 Q02110]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P32755 P32755]
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** [http://www.genome.jp/dbget-bin/www_bget?C05601 C05601]
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** [http://www.uniprot.org/uniprot/O48604 O48604]
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{{#set: smiles=C(CCC(O)CC(C([O-])=O)=O)([O-])=O}}
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** [http://www.uniprot.org/uniprot/O23920 O23920]
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{{#set: inchi key=InChIKey=HNOAJOYERZTSNK-BYPYZUCNSA-L}}
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** [http://www.uniprot.org/uniprot/P93836 P93836]
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{{#set: common name=(4S)-4-hydroxy-2-oxoheptanedioate}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: molecular weight=188.137    }}
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{{#set: common name=Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase}}
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{{#set: common name=4-hydroxy-2-ketoheptane-1,7-dioate|2-oxo-4-hydroxyhepta-1,7-dioate|4-hydroxy-2-oxo-heptanedioate|4-hydroxy-2-ketopimelate|2-keto-4-hydroxypimelate}}
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{{#set: ec number=EC-1.13.11.27}}
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{{#set: consumed by=4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN}}
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{{#set: gene associated=Ec-23_003630}}
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{{#set: in pathway=PWY-1581|PWY-7432|TYRFUMCAT-PWY|PWY-1422}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aragem}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 21:30, 17 March 2018

Metabolite CPD-804

  • smiles:
    • C(CCC(O)CC(C([O-])=O)=O)([O-])=O
  • inchi key:
    • InChIKey=HNOAJOYERZTSNK-BYPYZUCNSA-L
  • common name:
    • (4S)-4-hydroxy-2-oxoheptanedioate
  • molecular weight:
    • 188.137
  • Synonym(s):
    • 4-hydroxy-2-ketoheptane-1,7-dioate
    • 2-oxo-4-hydroxyhepta-1,7-dioate
    • 4-hydroxy-2-oxo-heptanedioate
    • 4-hydroxy-2-ketopimelate
    • 2-keto-4-hydroxypimelate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C(CCC(O)CC(C([O-])=O)=O)([O-])=O" cannot be used as a page name in this wiki.



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