Difference between revisions of "CPD-12724"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN] == * direction: ** LEFT-TO-RIG...")
 
(Created page with "Category:Gene == Gene Ec-18_000990 == * left end position: ** 918229 * transcription direction: ** NEGATIVE * right end position: ** 927429 * centisome position: ** 18.638...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN] ==
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== Gene Ec-18_000990 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 918229
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/3.6.1.67 EC-3.6.1.67]
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** NEGATIVE
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* right end position:
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** 927429
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* centisome position:
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** 18.638351   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0020_0133
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** Esi0020_0133
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** GPPS
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[GPPSYN-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[DIHYDRONEOPTERIN-P3]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[DIHYDRONEOPTERIN-P]][c] '''+''' 1 [[PROTON]][c]
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** esiliculosus_genome
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* With common name(s):
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***ec-number
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** 1 H2O[c] '''+''' 1 7,8-dihydroneopterin 3'-triphosphate[c] '''=>''' 1 diphosphate[c] '''+''' 1 7,8-dihydroneopterin 3'-phosphate[c] '''+''' 1 H+[c]
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* [[RXN-9003]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-01_009100]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-15_000350]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-05_006830]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-22_000120]]
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** [[pantograph]]-[[aragem]]
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−
* [[Ec-19_003700]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-19_001540]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-10_002170]]
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** [[pantograph]]-[[aragem]]
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−
* [[Ec-15_003300]]
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** [[pantograph]]-[[aragem]]
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−
* [[Ec-01_000090]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-19_001450]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-24_003120]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-06_007890]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-09_003740]]
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** [[pantograph]]-[[aragem]]
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−
* [[Ec-19_001310]]
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** [[pantograph]]-[[aragem]]
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−
* [[Ec-18_000740]]
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−
** [[pantograph]]-[[aragem]]
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−
* [[Ec-10_002470]]
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** [[pantograph]]-[[aragem]]
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−
* [[Ec-09_003200]]
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−
** [[pantograph]]-[[aragem]]
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−
* [[Ec-15_001630]]
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** [[pantograph]]-[[aragem]]
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−
* [[Ec-12_001230]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-06_009970]]
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** [[pantograph]]-[[aragem]]
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−
* [[Ec-06_010060]]
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** [[pantograph]]-[[aragem]]
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−
* [[Ec-00_002040]]
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** [[pantograph]]-[[aragem]]
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−
* [[Ec-04_000920]]
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** [[pantograph]]-[[aragem]]
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−
* [[Ec-14_006970]]
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** [[pantograph]]-[[aragem]]
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−
* [[Ec-12_006470]]
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** [[pantograph]]-[[aragem]]
 
** [[pantograph]]-[[aragem]]
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* [[Ec-14_006830]]
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* [[RXN-9384]]
 
** [[pantograph]]-[[aragem]]
 
** [[pantograph]]-[[aragem]]
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* [[Ec-15_000660]]
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* [[RXN0-5180]]
 
** [[pantograph]]-[[aragem]]
 
** [[pantograph]]-[[aragem]]
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== Pathways ==
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== Pathways associated ==
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* [[PWY-6147]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6147 PWY-6147]
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* [[PWY-7736]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6859]]
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== Reconstruction information  ==
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* [[PWY-7709]]
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* [[orthology]]:
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* [[PWY-6383]]
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** [[pantograph]]:
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* [[PWY-7235]]
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*** [[aragem]]
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* [[PWY-7182]]
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* [[PWY-7141]]
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* [[PWY-5123]]
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* [[PWY-5122]]
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* [[PWY-7102]]
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* [[PWY-7659]]
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* [[PWY-7410]]
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* [[PWY3O-19]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=918229}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25302 25302]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=927429}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04638 R04638]
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{{#set: centisome position=18.638351    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0020_0133|Esi0020_0133|GPPS}}
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{{#set: ec number=EC-3.6.1.67}}
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{{#set: reaction associated=GPPSYN-RXN|RXN-9003|RXN-9384|RXN0-5180}}
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{{#set: gene associated=Ec-01_009100|Ec-15_000350|Ec-05_006830|Ec-22_000120|Ec-19_003700|Ec-19_001540|Ec-10_002170|Ec-15_003300|Ec-01_000090|Ec-19_001450|Ec-24_003120|Ec-06_007890|Ec-09_003740|Ec-19_001310|Ec-18_000740|Ec-10_002470|Ec-09_003200|Ec-15_001630|Ec-12_001230|Ec-06_009970|Ec-06_010060|Ec-00_002040|Ec-04_000920|Ec-14_006970|Ec-12_006470|Ec-14_006830|Ec-15_000660}}
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{{#set: pathway associated=PWY-7736|PWY-6859|PWY-7709|PWY-6383|PWY-7235|PWY-7182|PWY-7141|PWY-5123|PWY-5122|PWY-7102|PWY-7659|PWY-7410|PWY3O-19}}
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{{#set: in pathway=PWY-6147}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aragem}}
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Revision as of 21:33, 17 March 2018

Gene Ec-18_000990

  • left end position:
    • 918229
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 927429
  • centisome position:
    • 18.638351
  • Synonym(s):
    • Esi_0020_0133
    • Esi0020_0133
    • GPPS

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD-12724&oldid=13514"