Difference between revisions of "RH-Group"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CARBPSYN-RXN CARBPSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** carbamoyl-phosphate s...")
 
(Created page with "Category:Gene == Gene Ec-08_002360 == * left end position: ** 2181247 * transcription direction: ** POSITIVE * right end position: ** 2190229 * centisome position: ** 32.5...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CARBPSYN-RXN CARBPSYN-RXN] ==
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== Gene Ec-08_002360 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2181247
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* common name:
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* transcription direction:
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** carbamoyl-phosphate synthase (glutamine-hydrolyzing)
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/6.3.5.5 EC-6.3.5.5]
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** 2190229
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* centisome position:
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** 32.57019   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0007_0157
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** Esi0007_0157
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[RXN0-2161]]
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** 1 [[GLN]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[HCO3]][c] '''+''' 2 [[ATP]][c] '''=>''' 2 [[ADP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[CARBAMOYL-P]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[Pi]][c]
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** esiliculosus_genome
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* With common name(s):
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***go-term
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** 1 L-glutamine[c] '''+''' 1 H2O[c] '''+''' 1 hydrogen carbonate[c] '''+''' 2 ATP[c] '''=>''' 2 ADP[c] '''+''' 1 L-glutamate[c] '''+''' 1 carbamoyl phosphate[c] '''+''' 2 H+[c] '''+''' 1 phosphate[c]
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* [[SERINE--TRNA-LIGASE-RXN]]
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** esiliculosus_genome
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== Genes associated with this reaction  ==
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***go-term
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Ec-10_006110]]
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* [[TRNA-CHARGING-PWY]]
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** ESILICULOSUS_GENOME
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* [[PWY0-901]]
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***GO-TERM
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* [[PWY-6281]]
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== Pathways ==
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* [[PWY-7400]], L-arginine biosynthesis IV (archaebacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7400 PWY-7400]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5154 PWY-5154]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5686]], UMP biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYNBSUB-PWY ARGSYNBSUB-PWY]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYN-PWY ARGSYN-PWY]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=2181247}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00575 R00575]
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{{#set: transcription direction=POSITIVE}}
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* UNIPROT:
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{{#set: right end position=2190229}}
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** [http://www.uniprot.org/uniprot/P08955 P08955]
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{{#set: centisome position=32.57019    }}
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** [http://www.uniprot.org/uniprot/P13258 P13258]
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{{#set: common name=Esi_0007_0157|Esi0007_0157}}
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** [http://www.uniprot.org/uniprot/P38099 P38099]
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{{#set: reaction associated=RXN0-2161|SERINE--TRNA-LIGASE-RXN}}
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** [http://www.uniprot.org/uniprot/P27708 P27708]
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{{#set: pathway associated=TRNA-CHARGING-PWY|PWY0-901|PWY-6281}}
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** [http://www.uniprot.org/uniprot/Q91437 Q91437]
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** [http://www.uniprot.org/uniprot/O28994 O28994]
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** [http://www.uniprot.org/uniprot/P57689 P57689]
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** [http://www.uniprot.org/uniprot/P38098 P38098]
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** [http://www.uniprot.org/uniprot/Q9WZ27 Q9WZ27]
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** [http://www.uniprot.org/uniprot/Q9PMG8 Q9PMG8]
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** [http://www.uniprot.org/uniprot/Q9JXW8 Q9JXW8]
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** [http://www.uniprot.org/uniprot/Q9JVZ6 Q9JVZ6]
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** [http://www.uniprot.org/uniprot/P25993 P25993]
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** [http://www.uniprot.org/uniprot/Q9PIL7 Q9PIL7]
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** [http://www.uniprot.org/uniprot/P25994 P25994]
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** [http://www.uniprot.org/uniprot/Q9JW02 Q9JW02]
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** [http://www.uniprot.org/uniprot/O25577 O25577]
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** [http://www.uniprot.org/uniprot/P52557 P52557]
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** [http://www.uniprot.org/uniprot/P46537 P46537]
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** [http://www.uniprot.org/uniprot/P18185 P18185]
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** [http://www.uniprot.org/uniprot/P07259 P07259]
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** [http://www.uniprot.org/uniprot/P20054 P20054]
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** [http://www.uniprot.org/uniprot/P05990 P05990]
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** [http://www.uniprot.org/uniprot/P14845 P14845]
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** [http://www.uniprot.org/uniprot/Q06950 Q06950]
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** [http://www.uniprot.org/uniprot/Q92115 Q92115]
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** [http://www.uniprot.org/uniprot/Q09794 Q09794]
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** [http://www.uniprot.org/uniprot/P03965 P03965]
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** [http://www.uniprot.org/uniprot/P07258 P07258]
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** [http://www.uniprot.org/uniprot/P00968 P00968]
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** [http://www.uniprot.org/uniprot/P0A6F1 P0A6F1]
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** [http://www.uniprot.org/uniprot/P93345 P93345]
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** [http://www.uniprot.org/uniprot/Q27732 Q27732]
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** [http://www.uniprot.org/uniprot/Q27448 Q27448]
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** [http://www.uniprot.org/uniprot/O50236 O50236]
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** [http://www.uniprot.org/uniprot/O94313 O94313]
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** [http://www.uniprot.org/uniprot/Q59968 Q59968]
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** [http://www.uniprot.org/uniprot/Q59969 Q59969]
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** [http://www.uniprot.org/uniprot/O50301 O50301]
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** [http://www.uniprot.org/uniprot/O50302 O50302]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=carbamoyl-phosphate synthase (glutamine-hydrolyzing)}}
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{{#set: ec number=EC-6.3.5.5}}
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{{#set: gene associated=Ec-10_006110}}
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{{#set: in pathway=PWY-7400|PWY-5154|PWY-5686|ARGSYNBSUB-PWY|ARGSYN-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 21:34, 17 March 2018

Gene Ec-08_002360

  • left end position:
    • 2181247
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2190229
  • centisome position:
    • 32.57019
  • Synonym(s):
    • Esi_0007_0157
    • Esi0007_0157

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RH-Group&oldid=13546"