Difference between revisions of "CPD-9446"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALANINE--TRNA-LIGASE-RXN ALANINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOGLYCERATE-PHOSPHATASE-RXN PHOSPHOGLYCERATE-PHOSPHATASE-RXN] == * direction: ** LEFT-TO-RIGHT...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALANINE--TRNA-LIGASE-RXN ALANINE--TRNA-LIGASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOGLYCERATE-PHOSPHATASE-RXN PHOSPHOGLYCERATE-PHOSPHATASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** alanine-tRNA ligase
 
−
** Alanyl-tRNA Synthetase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.1.1.7 EC-6.1.1.7]
+
** [http://enzyme.expasy.org/EC/3.1.3.20 EC-3.1.3.20]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[L-ALPHA-ALANINE]][c] '''+''' 1 [[ALA-tRNAs]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[Charged-ALA-tRNAs]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[2-PG]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[GLYCERATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-alanine[c] '''+''' 1 a tRNAala[c] '''+''' 1 ATP[c] '''+''' 1 H+[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 an L-alanyl-[tRNAala][c]
+
** 1 H2O[c] '''+''' 1 2-phospho-D-glycerate[c] '''=>''' 1 phosphate[c] '''+''' 1 D-glycerate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Ec-20_000890]]
 
−
** ESILICULOSUS_GENOME
 
−
***EC-NUMBER
 
−
* [[Ec-07_007070]]
 
−
** ESILICULOSUS_GENOME
 
−
***EC-NUMBER
 
−
* [[Ec-01_006770]]
 
−
** ESILICULOSUS_GENOME
 
−
***GO-TERM
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
 
−
** '''21''' reactions found over '''21''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[gap-filling]]
−
** [[pathwaytools]]:
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[meneco]]
 +
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12540 12540]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21156 21156]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03038 R03038]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01748 R01748]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P56452 P56452]
+
−
** [http://www.uniprot.org/uniprot/O27718 O27718]
+
−
** [http://www.uniprot.org/uniprot/O34526 O34526]
+
−
** [http://www.uniprot.org/uniprot/P47534 P47534]
+
−
** [http://www.uniprot.org/uniprot/O58035 O58035]
+
−
** [http://www.uniprot.org/uniprot/Q9PI05 Q9PI05]
+
−
** [http://www.uniprot.org/uniprot/Q9JTG4 Q9JTG4]
+
−
** [http://www.uniprot.org/uniprot/Q57984 Q57984]
+
−
** [http://www.uniprot.org/uniprot/O51238 O51238]
+
−
** [http://www.uniprot.org/uniprot/Q9CEW0 Q9CEW0]
+
−
** [http://www.uniprot.org/uniprot/O83980 O83980]
+
−
** [http://www.uniprot.org/uniprot/Q9X1B6 Q9X1B6]
+
−
** [http://www.uniprot.org/uniprot/Q9ZJY5 Q9ZJY5]
+
−
** [http://www.uniprot.org/uniprot/O67323 O67323]
+
−
** [http://www.uniprot.org/uniprot/Q9ZCA4 Q9ZCA4]
+
−
** [http://www.uniprot.org/uniprot/Q9Z714 Q9Z714]
+
−
** [http://www.uniprot.org/uniprot/P49588 P49588]
+
−
** [http://www.uniprot.org/uniprot/P43815 P43815]
+
−
** [http://www.uniprot.org/uniprot/P50475 P50475]
+
−
** [http://www.uniprot.org/uniprot/P24075 P24075]
+
−
** [http://www.uniprot.org/uniprot/P27866 P27866]
+
−
** [http://www.uniprot.org/uniprot/P35029 P35029]
+
−
** [http://www.uniprot.org/uniprot/P40825 P40825]
+
−
** [http://www.uniprot.org/uniprot/P75368 P75368]
+
−
** [http://www.uniprot.org/uniprot/Q48976 Q48976]
+
−
** [http://www.uniprot.org/uniprot/P00957 P00957]
+
−
** [http://www.uniprot.org/uniprot/P21894 P21894]
+
−
** [http://www.uniprot.org/uniprot/O50189 O50189]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=alanine-tRNA ligase}}
+
{{#set: ec number=EC-3.1.3.20}}
−
{{#set: common name=Alanyl-tRNA Synthetase}}
+
{{#set: in pathway=}}
−
{{#set: ec number=EC-6.1.1.7}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: gene associated=Ec-20_000890|Ec-07_007070|Ec-01_006770}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: in pathway=TRNA-CHARGING-PWY}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Revision as of 21:36, 17 March 2018

Reaction PHOSPHOGLYCERATE-PHOSPHATASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 2-phospho-D-glycerate[c] => 1 phosphate[c] + 1 D-glycerate[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links




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