Difference between revisions of "4.2.3.12-RXN"

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(Created page with "Category:Gene == Gene Ec-16_004110 == * left end position: ** 4230445 * transcription direction: ** POSITIVE * right end position: ** 4234294 * centisome position: ** 79.2...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN] == * direction: ** LEFT-TO...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-16_004110 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN] ==
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* left end position:
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* direction:
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** 4230445
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** Hydroxymethylglutaryl-CoA lyase
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* right end position:
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* ec number:
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** 4234294
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** [http://enzyme.expasy.org/EC/4.1.3.4 EC-4.1.3.4]
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* centisome position:
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** 79.25664   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0430_0007
 
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** Esi0430_0007
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[CHOLINE-KINASE-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[3-HYDROXY-3-METHYL-GLUTARYL-COA]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[3-KETOBUTYRATE]][c]
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***automated-name-match
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* With common name(s):
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* [[ETHANOLAMINE-KINASE-RXN]]
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** 1 (S)-3-hydroxy-3-methylglutaryl-CoA[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 acetoacetate[c]
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** esiliculosus_genome
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***automated-name-match
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-7782]]
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* [[Ec-26_006120]]
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* [[PWY4FS-6]]
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** ESILICULOSUS_GENOME
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* [[PWY-3385]]
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***EC-NUMBER
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* [[PWY3O-450]]
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** [[pantograph]]-[[aragem]]
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== Pathways ==
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* [[PWY66-367]], ketogenesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-367 PWY66-367]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[LEU-DEG2-PWY]], L-leucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5074]], mevalonate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5074 PWY-5074]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=4230445}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24404 24404]
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{{#set: right end position=4234294}}
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* LIGAND-RXN:
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{{#set: centisome position=79.25664    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01360 R01360]
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{{#set: common name=Esi_0430_0007|Esi0430_0007}}
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* UNIPROT:
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{{#set: reaction associated=CHOLINE-KINASE-RXN|ETHANOLAMINE-KINASE-RXN}}
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** [http://www.uniprot.org/uniprot/P35914 P35914]
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{{#set: pathway associated=PWY-7782|PWY4FS-6|PWY-3385|PWY3O-450}}
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** [http://www.uniprot.org/uniprot/P35915 P35915]
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** [http://www.uniprot.org/uniprot/Q8L7K2 Q8L7K2]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Hydroxymethylglutaryl-CoA lyase}}
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{{#set: ec number=EC-4.1.3.4}}
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{{#set: gene associated=Ec-26_006120}}
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{{#set: in pathway=PWY66-367|LEU-DEG2-PWY|PWY-5074}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 21:39, 17 March 2018

Reaction HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Hydroxymethylglutaryl-CoA lyase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-367, ketogenesis: PWY66-367
    • 3 reactions found over 5 reactions in the full pathway
  • LEU-DEG2-PWY, L-leucine degradation I: LEU-DEG2-PWY
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-5074, mevalonate degradation: PWY-5074
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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