Difference between revisions of "TRNA-fragment"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=FE+3 FE+3] == * smiles: ** [Fe+++] * inchi key: ** InChIKey=VTLYFUHAOXGGBS-UHFFFAOYSA-N * commo...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.3.12-RXN 4.2.3.12-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 6-pyruvoyl tetrahydro...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=FE+3 FE+3] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.3.12-RXN 4.2.3.12-RXN] ==
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* smiles:
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* direction:
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** [Fe+++]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=VTLYFUHAOXGGBS-UHFFFAOYSA-N
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* common name:
 
* common name:
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** Fe3+
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** 6-pyruvoyl tetrahydropterin synthase/QueD family protein
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* molecular weight:
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* ec number:
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** 55.847   
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** [http://enzyme.expasy.org/EC/4.2.3.12 EC-4.2.3.12]
 
* Synonym(s):
 
* Synonym(s):
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** ferric iron
 
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** Fe+++
 
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** Fe+3
 
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** ferric ion
 
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** fe(iii)
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[TransportSeed_FE+3]]
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* With identifiers:
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* [[RXN-14387]]
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** 1 [[DIHYDRONEOPTERIN-P3]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[P3I]][c] '''+''' 1 [[6-PYRUVOYL-5678-TETRAHYDROPTERIN]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[TransportSeed_FE+3]]
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** 1 7,8-dihydroneopterin 3'-triphosphate[c] '''=>''' 1 H+[c] '''+''' 1 PPPi[c] '''+''' 1 6-pyruvoyl tetrahydropterin[c]
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* [[RXN-12540]]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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* [[FESO3OXI-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[ExchangeSeed_FE+3]]
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* [[Ec-10_002190]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-27_003470]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-5664]], tetrahydrobiopterin biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5664 PWY-5664]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5663]], tetrahydrobiopterin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5663 PWY-5663]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7442]], drosopterin and aurodrosopterin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7442 PWY-7442]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6983]], tetrahydrobiopterin biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6983 PWY-6983]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* BIGG : 50061
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22048 22048]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=29936 29936]
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* LIGAND-RXN:
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* HMDB : HMDB12943
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** [http://www.genome.jp/dbget-bin/www_bget?R04286 R04286]
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* LIGAND-CPD:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.genome.jp/dbget-bin/www_bget?C14819 C14819]
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{{#set: common name=6-pyruvoyl tetrahydropterin synthase/QueD family protein}}
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* CHEMSPIDER:
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{{#set: ec number=EC-4.2.3.12}}
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** [http://www.chemspider.com/Chemical-Structure.27815.html 27815]
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{{#set: gene associated=Ec-10_002190|Ec-27_003470}}
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* CHEBI:
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{{#set: in pathway=PWY-5664|PWY-5663|PWY-7442|PWY-6983}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=29034 29034]
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{{#set: reconstruction category=annotation}}
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* METABOLIGHTS : MTBLC29034
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: smiles=[Fe+++]}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: inchi key=InChIKey=VTLYFUHAOXGGBS-UHFFFAOYSA-N}}
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{{#set: common name=Fe3+}}
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{{#set: molecular weight=55.847    }}
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{{#set: common name=ferric iron|Fe+++|Fe+3|ferric ion|fe(iii)}}
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{{#set: consumed by=TransportSeed_FE+3|RXN-14387}}
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{{#set: produced by=TransportSeed_FE+3|RXN-12540}}
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{{#set: consumed or produced by=FESO3OXI-RXN|ExchangeSeed_FE+3}}
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Revision as of 21:40, 17 March 2018

Reaction 4.2.3.12-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 6-pyruvoyl tetrahydropterin synthase/QueD family protein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5664, tetrahydrobiopterin biosynthesis II: PWY-5664
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5663, tetrahydrobiopterin biosynthesis I: PWY-5663
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7442, drosopterin and aurodrosopterin biosynthesis: PWY-7442
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6983, tetrahydrobiopterin biosynthesis III: PWY-6983
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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