Difference between revisions of "Ec-05 002180"

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(Created page with "Category:Gene == Gene Ec-20_002470 == * left end position: ** 2496176 * transcription direction: ** POSITIVE * right end position: ** 2505985 * centisome position: ** 48.4...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17114 RXN-17114] == * direction: ** LEFT-TO-RIGHT * common name: ** Beta-hydroxydecanoyl thiol...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-20_002470 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17114 RXN-17114] ==
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* left end position:
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* direction:
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** 2496176
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
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* right end position:
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** ClpP/crotonase-like domain
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** 2505985
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** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
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* centisome position:
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* ec number:
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** 48.40908   
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0403_0021
 
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** Esi0403_0021
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ACID-PHOSPHATASE-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[WATER]][c] '''+''' 1 [[CPD-18492]][c] '''=>''' 1 [[CPD-18493]][c]
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***go-term
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* With common name(s):
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* [[RXN-5822]]
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** 1 H2O[c] '''+''' 1 (2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA[c] '''=>''' 1 (3S)-hydroxy-(6Z,9Z,12Z,15Z,18Z)-tetracosapentaenoyl-CoA[c]
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** esiliculosus_genome
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***go-term
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-6348]]
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* [[Ec-06_001380]]
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* [[PWY-5083]]
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** ESILICULOSUS_GENOME
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* [[NADPHOS-DEPHOS-PWY]]
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***EC-NUMBER
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* [[NAD-BIOSYNTHESIS-II]]
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* [[Ec-16_001250]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-14_006530]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-16_003560]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways ==
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* [[PWY-7726]], (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7726 PWY-7726]
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** '''13''' reactions found over '''13''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=2496176}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
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{{#set: right end position=2505985}}
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{{#set: common name=ClpP/crotonase-like domain}}
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{{#set: centisome position=48.40908    }}
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{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
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{{#set: common name=Esi_0403_0021|Esi0403_0021}}
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{{#set: ec number=EC-4.2.1.17}}
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{{#set: reaction associated=ACID-PHOSPHATASE-RXN|RXN-5822}}
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{{#set: gene associated=Ec-06_001380|Ec-16_001250|Ec-14_006530|Ec-16_003560}}
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{{#set: pathway associated=PWY-6348|PWY-5083|NADPHOS-DEPHOS-PWY|NAD-BIOSYNTHESIS-II}}
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{{#set: in pathway=PWY-7726}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 21:43, 17 March 2018

Reaction RXN-17114

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
    • ClpP/crotonase-like domain
    • enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 (2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA[c] => 1 (3S)-hydroxy-(6Z,9Z,12Z,15Z,18Z)-tetracosapentaenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7726, (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): PWY-7726
    • 13 reactions found over 13 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-05_002180&oldid=14208"