Difference between revisions of "RXN-10862"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Ec-05_004090 == * left end position: ** 6037858 * transcription direction: ** NEGATIVE * right end position: ** 6047842 * centisome position: ** 66.3...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DUDPKIN-RXN DUDPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** nucleoside diphosphate...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Ec-05_004090 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DUDPKIN-RXN DUDPKIN-RXN] ==
−
* left end position:
+
* direction:
−
** 6037858
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** NEGATIVE
+
** nucleoside diphosphate kinase
−
* right end position:
+
** Nucleoside diphosphate kinase
−
** 6047842
+
* ec number:
−
* centisome position:
+
** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
−
** 66.32455   
+
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0395_0018
 
−
** Esi0395_0018
 
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[DNA-DIRECTED-RNA-POLYMERASE-RXN]]
+
* With identifiers:
−
** esiliculosus_genome
+
** 1 [[ATP]][c] '''+''' 1 [[DUDP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[DUTP]][c]
−
***go-term
+
* With common name(s):
−
== Pathways associated ==
+
** 1 ATP[c] '''+''' 1 dUDP[c] '''=>''' 1 ADP[c] '''+''' 1 dUTP[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Ec-11_005170]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-11_004330]]
 +
** ESILICULOSUS_GENOME
 +
***EC-NUMBER
 +
** [[pantograph]]-[[aragem]]
 +
* [[Ec-03_001380]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-04_001140]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
** [[pantograph]]-[[aragem]]
 +
* [[Ec-07_000140]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-22_003280]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-26_003930]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
== Pathways ==
 +
* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
 +
** '''14''' reactions found over '''17''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=6037858}}
+
* RHEA:
−
{{#set: transcription direction=NEGATIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28582 28582]
−
{{#set: right end position=6047842}}
+
* LIGAND-RXN:
−
{{#set: centisome position=66.32455    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02331 R02331]
−
{{#set: common name=Esi_0395_0018|Esi0395_0018}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: reaction associated=DNA-DIRECTED-RNA-POLYMERASE-RXN}}
+
{{#set: common name=nucleoside diphosphate kinase}}
 +
{{#set: common name=Nucleoside diphosphate kinase}}
 +
{{#set: ec number=EC-2.7.4.6}}
 +
{{#set: gene associated=Ec-11_005170|Ec-11_004330|Ec-03_001380|Ec-04_001140|Ec-07_000140|Ec-22_003280|Ec-26_003930}}
 +
{{#set: in pathway=PWY-7184|PWY-6545|PWY0-166}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 21:43, 17 March 2018

Reaction DUDPKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • nucleoside diphosphate kinase
    • Nucleoside diphosphate kinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 dUDP[c] => 1 ADP[c] + 1 dUTP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7184, pyrimidine deoxyribonucleotides de novo biosynthesis I: PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545, pyrimidine deoxyribonucleotides de novo biosynthesis III: PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY0-166, superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): PWY0-166
    • 14 reactions found over 17 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-10862&oldid=14222"