Difference between revisions of "Ec-19 004740"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DUDPKIN-RXN DUDPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** nucleoside diphosphate...")
 
(Created page with "Category:Gene == Gene Ec-10_003200 == * left end position: ** 3267004 * transcription direction: ** POSITIVE * right end position: ** 3270670 * centisome position: ** 50.2...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DUDPKIN-RXN DUDPKIN-RXN] ==
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== Gene Ec-10_003200 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3267004
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* common name:
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* transcription direction:
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** nucleoside diphosphate kinase
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** POSITIVE
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** Nucleoside diphosphate kinase
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* right end position:
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* ec number:
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** 3270670
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** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
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* centisome position:
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** 50.253986   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0117_0003
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** Esi0117_0003
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[RXN-15556]]
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** 1 [[DUDP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[DUTP]][c]
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** esiliculosus_genome
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* With common name(s):
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***automated-name-match
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** 1 dUDP[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 dUTP[c]
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== Pathways associated ==
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* [[PWY-7511]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-26_003930]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-11_004330]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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* [[Ec-04_001140]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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** [[pantograph]]-[[aragem]]
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* [[Ec-22_003280]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-07_000140]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-11_005170]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-03_001380]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways ==
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* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
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** '''14''' reactions found over '''17''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[aragem]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=3267004}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28582 28582]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=3270670}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02331 R02331]
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{{#set: centisome position=50.253986    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0117_0003|Esi0117_0003}}
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{{#set: common name=nucleoside diphosphate kinase}}
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{{#set: reaction associated=RXN-15556}}
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{{#set: common name=Nucleoside diphosphate kinase}}
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{{#set: pathway associated=PWY-7511}}
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{{#set: ec number=EC-2.7.4.6}}
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{{#set: gene associated=Ec-26_003930|Ec-11_004330|Ec-04_001140|Ec-22_003280|Ec-07_000140|Ec-11_005170|Ec-03_001380}}
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{{#set: in pathway=PWY-7184|PWY-6545|PWY0-166}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aragem}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 22:43, 17 March 2018

Gene Ec-10_003200

  • left end position:
    • 3267004
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3270670
  • centisome position:
    • 50.253986
  • Synonym(s):
    • Esi_0117_0003
    • Esi0117_0003

Reactions associated

  • RXN-15556
    • esiliculosus_genome
      • automated-name-match

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-19_004740&oldid=14224"