Difference between revisions of "Ec-19 004740"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DUDPKIN-RXN DUDPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** nucleoside diphosphate...")
 
(Created page with "Category:Gene == Gene Ec-10_003200 == * left end position: ** 3267004 * transcription direction: ** POSITIVE * right end position: ** 3270670 * centisome position: ** 50.2...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DUDPKIN-RXN DUDPKIN-RXN] ==
+
== Gene Ec-10_003200 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 3267004
−
* common name:
+
* transcription direction:
−
** nucleoside diphosphate kinase
+
** POSITIVE
−
** Nucleoside diphosphate kinase
+
* right end position:
−
* ec number:
+
** 3270670
−
** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
+
* centisome position:
 +
** 50.253986   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0117_0003
 +
** Esi0117_0003
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[RXN-15556]]
−
** 1 [[DUDP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[DUTP]][c]
+
** esiliculosus_genome
−
* With common name(s):
+
***automated-name-match
−
** 1 dUDP[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 dUTP[c]
+
== Pathways associated ==
−
 
+
* [[PWY-7511]]
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-26_003930]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-11_004330]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-04_001140]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-22_003280]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-07_000140]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-11_005170]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-03_001380]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
== Pathways ==
+
−
* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
+
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545]
+
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
+
−
** '''14''' reactions found over '''17''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[aragem]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=3267004}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28582 28582]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=3270670}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02331 R02331]
+
{{#set: centisome position=50.253986    }}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=Esi_0117_0003|Esi0117_0003}}
−
{{#set: common name=nucleoside diphosphate kinase}}
+
{{#set: reaction associated=RXN-15556}}
−
{{#set: common name=Nucleoside diphosphate kinase}}
+
{{#set: pathway associated=PWY-7511}}
−
{{#set: ec number=EC-2.7.4.6}}
+
−
{{#set: gene associated=Ec-26_003930|Ec-11_004330|Ec-04_001140|Ec-22_003280|Ec-07_000140|Ec-11_005170|Ec-03_001380}}
+
−
{{#set: in pathway=PWY-7184|PWY-6545|PWY0-166}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=aragem}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Revision as of 21:43, 17 March 2018

Gene Ec-10_003200

  • left end position:
    • 3267004
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3270670
  • centisome position:
    • 50.253986
  • Synonym(s):
    • Esi_0117_0003
    • Esi0117_0003

Reactions associated

  • RXN-15556
    • esiliculosus_genome
      • automated-name-match

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-19_004740&oldid=14224"