Difference between revisions of "Ec-10 001150"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=QUINOPRIBOTRANS-RXN QUINOPRIBOTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** nicotin...")
 
(Created page with "Category:Gene == Gene Ec-14_003840 == * left end position: ** 3573679 * transcription direction: ** NEGATIVE * right end position: ** 3580251 * centisome position: ** 54.4...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=QUINOPRIBOTRANS-RXN QUINOPRIBOTRANS-RXN] ==
+
== Gene Ec-14_003840 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 3573679
−
* common name:
+
* transcription direction:
−
** nicotinate-nucleotide diphosphorylase (carboxylating)
+
** NEGATIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/2.4.2.19 EC-2.4.2.19]
+
** 3580251
 +
* centisome position:
 +
** 54.47326   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0286_0013
 +
** Esi0286_0013
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[2.4.1.223-RXN]]
−
** 1 [[PRPP]][c] '''+''' 1 [[QUINOLINATE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NICOTINATE_NUCLEOTIDE]][c] '''+''' 1 [[PPI]][c]
+
** esiliculosus_genome
−
* With common name(s):
+
***go-term
−
** 1 5-phospho-α-D-ribose 1-diphosphate[c] '''+''' 1 quinolinate[c] '''+''' 2 H+[c] '''=>''' 1 CO2[c] '''+''' 1 β-nicotinate D-ribonucleotide[c] '''+''' 1 diphosphate[c]
+
== Pathways associated ==
−
 
+
* [[PWY-6558]]
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-05_000790]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-09_003390]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-27_002350]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
== Pathways ==
+
−
* [[PWY-5653]], NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5653 PWY-5653]
+
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-7342]], superpathway of nicotine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7342 PWY-7342]
+
−
** '''4''' reactions found over '''13''' reactions in the full pathway
+
−
* [[PYRIDNUCSYN-PWY]], NAD biosynthesis I (from aspartate): [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSYN-PWY PYRIDNUCSYN-PWY]
+
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-5316]], nicotine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5316 PWY-5316]
+
−
** '''3''' reactions found over '''9''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[aragem]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=3573679}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12733 12733]
+
{{#set: transcription direction=NEGATIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=3580251}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03348 R03348]
+
{{#set: centisome position=54.47326    }}
−
* UNIPROT:
+
{{#set: common name=Esi_0286_0013|Esi0286_0013}}
−
** [http://www.uniprot.org/uniprot/Q9JSX8 Q9JSX8]
+
{{#set: reaction associated=2.4.1.223-RXN}}
−
** [http://www.uniprot.org/uniprot/Q57916 Q57916]
+
{{#set: pathway associated=PWY-6558}}
−
** [http://www.uniprot.org/uniprot/P30011 P30011]
+
−
** [http://www.uniprot.org/uniprot/P46714 P46714]
+
−
** [http://www.uniprot.org/uniprot/Q15274 Q15274]
+
−
** [http://www.uniprot.org/uniprot/P77938 P77938]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=nicotinate-nucleotide diphosphorylase (carboxylating)}}
+
−
{{#set: ec number=EC-2.4.2.19}}
+
−
{{#set: gene associated=Ec-05_000790|Ec-09_003390|Ec-27_002350}}
+
−
{{#set: in pathway=PWY-5653|PWY-7342|PYRIDNUCSYN-PWY|PWY-5316}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=aragem}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Revision as of 21:48, 17 March 2018

Gene Ec-14_003840

  • left end position:
    • 3573679
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3580251
  • centisome position:
    • 54.47326
  • Synonym(s):
    • Esi_0286_0013
    • Esi0286_0013

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-10_001150&oldid=14554"