Difference between revisions of "CPD-8624"

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(Created page with "Category:Gene == Gene Ec-11_001530 == * left end position: ** 1613351 * transcription direction: ** NEGATIVE * right end position: ** 1613518 * centisome position: ** 25.6...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=QUINOPRIBOTRANS-RXN QUINOPRIBOTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** nicotin...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-11_001530 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=QUINOPRIBOTRANS-RXN QUINOPRIBOTRANS-RXN] ==
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* left end position:
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* direction:
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** 1613351
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** nicotinate-nucleotide diphosphorylase (carboxylating)
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* right end position:
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* ec number:
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** 1613518
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** [http://enzyme.expasy.org/EC/2.4.2.19 EC-2.4.2.19]
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* centisome position:
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** 25.650852   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0119_0091
 
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** Esi0119_0091
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[PEROXID-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[QUINOLINATE]][c] '''+''' 1 [[PRPP]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[NICOTINATE_NUCLEOTIDE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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***go-term
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* With common name(s):
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* [[RXN-11329]]
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** 1 quinolinate[c] '''+''' 1 5-phospho-α-D-ribose 1-diphosphate[c] '''+''' 2 H+[c] '''=>''' 1 β-nicotinate D-ribonucleotide[c] '''+''' 1 diphosphate[c] '''+''' 1 CO2[c]
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** esiliculosus_genome
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***automated-name-match
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== Genes associated with this reaction  ==
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* [[RXN-14240]]
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Genes have been associated with this reaction based on different elements listed below.
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** esiliculosus_genome
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* [[Ec-05_000790]]
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***go-term
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** ESILICULOSUS_GENOME
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* [[RXN-15288]]
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***GO-TERM
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** esiliculosus_genome
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* [[Ec-09_003390]]
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***go-term
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** [[pantograph]]-[[aragem]]
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* [[RXN-17352]]
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* [[Ec-27_002350]]
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** esiliculosus_genome
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** ESILICULOSUS_GENOME
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***go-term
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***GO-TERM
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* [[RXN-8635]]
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== Pathways  ==
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** esiliculosus_genome
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* [[PWY-5316]], nicotine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5316 PWY-5316]
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***go-term
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** '''3''' reactions found over '''9''' reactions in the full pathway
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== Pathways associated ==
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* [[PWY-7342]], superpathway of nicotine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7342 PWY-7342]
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* [[PWY-7214]]
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** '''4''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-6824]]
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* [[PYRIDNUCSYN-PWY]], NAD biosynthesis I (from aspartate): [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSYN-PWY PYRIDNUCSYN-PWY]
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* [[PWY-7445]]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5469]]
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* [[PWY-5653]], NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5653 PWY-5653]
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* [[PWY-5466]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5461]]
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=1613351}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12733 12733]
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{{#set: right end position=1613518}}
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* LIGAND-RXN:
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{{#set: centisome position=25.650852    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R03348 R03348]
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{{#set: common name=Esi_0119_0091|Esi0119_0091}}
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* UNIPROT:
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{{#set: reaction associated=PEROXID-RXN|RXN-11329|RXN-14240|RXN-15288|RXN-17352|RXN-8635}}
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** [http://www.uniprot.org/uniprot/Q9JSX8 Q9JSX8]
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{{#set: pathway associated=PWY-7214|PWY-6824|PWY-7445|PWY-5469|PWY-5466|PWY-5461}}
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** [http://www.uniprot.org/uniprot/Q57916 Q57916]
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** [http://www.uniprot.org/uniprot/P30011 P30011]
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** [http://www.uniprot.org/uniprot/P46714 P46714]
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** [http://www.uniprot.org/uniprot/Q15274 Q15274]
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** [http://www.uniprot.org/uniprot/P77938 P77938]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=nicotinate-nucleotide diphosphorylase (carboxylating)}}
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{{#set: ec number=EC-2.4.2.19}}
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{{#set: gene associated=Ec-05_000790|Ec-09_003390|Ec-27_002350}}
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{{#set: in pathway=PWY-5316|PWY-7342|PYRIDNUCSYN-PWY|PWY-5653}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 21:48, 17 March 2018

Reaction QUINOPRIBOTRANS-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • nicotinate-nucleotide diphosphorylase (carboxylating)
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5316, nicotine biosynthesis: PWY-5316
    • 3 reactions found over 9 reactions in the full pathway
  • PWY-7342, superpathway of nicotine biosynthesis: PWY-7342
    • 4 reactions found over 13 reactions in the full pathway
  • PYRIDNUCSYN-PWY, NAD biosynthesis I (from aspartate): PYRIDNUCSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-5653, NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde: PWY-5653
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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