Difference between revisions of "Ec-14 006720"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALIC-NADP-RXN MALIC-NADP-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Malic oxidoreduct...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2541 RXN-2541] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALIC-NADP-RXN MALIC-NADP-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2541 RXN-2541] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** Malic oxidoreductase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.40 EC-1.1.1.40]
+
** [http://enzyme.expasy.org/EC/2.5.1.115 EC-2.5.1.115]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[MAL]][c] '''+''' 1 [[NADP]][c] '''=>''' 1 [[NADPH]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** 1 [[HOMOGENTISATE]][c] '''+''' 1 [[PHYTYL-PYROPHOSPHATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[MPBQ]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 (S)-malate[c] '''+''' 1 NADP+[c] '''=>''' 1 NADPH[c] '''+''' 1 pyruvate[c] '''+''' 1 CO2[c]
+
** 1 homogentisate[c] '''+''' 1 phytyl diphosphate[c] '''+''' 1 H+[c] '''=>''' 1 2-methyl-6-phytyl-1,4-benzoquinol[c] '''+''' 1 diphosphate[c] '''+''' 1 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-01_003680]]
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* [[Ec-21_000990]]
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** ESILICULOSUS_GENOME
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−
***EC-NUMBER
+
 
** [[pantograph]]-[[aragem]]
 
** [[pantograph]]-[[aragem]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-241]], C4 photosynthetic carbon assimilation cycle, NADP-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-241 PWY-241]
+
* [[PWY-1422]], vitamin E biosynthesis (tocopherols): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1422 PWY-1422]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
+
−
** '''9''' reactions found over '''10''' reactions in the full pathway
+
−
* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
+
−
** '''13''' reactions found over '''13''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-aragem]]
−
*** [[aragem]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18253 18253]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00216 R00216]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07500 R07500]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P12628 P12628]
+
−
** [http://www.uniprot.org/uniprot/P06801 P06801]
+
−
** [http://www.uniprot.org/uniprot/P13697 P13697]
+
−
** [http://www.uniprot.org/uniprot/P16243 P16243]
+
−
** [http://www.uniprot.org/uniprot/O48656 O48656]
+
−
** [http://www.uniprot.org/uniprot/P22178 P22178]
+
−
** [http://www.uniprot.org/uniprot/P93139 P93139]
+
−
** [http://www.uniprot.org/uniprot/P34105 P34105]
+
−
** [http://www.uniprot.org/uniprot/P28227 P28227]
+
−
** [http://www.uniprot.org/uniprot/P36444 P36444]
+
−
** [http://www.uniprot.org/uniprot/P40927 P40927]
+
−
** [http://www.uniprot.org/uniprot/P37223 P37223]
+
−
** [http://www.uniprot.org/uniprot/P48163 P48163]
+
−
** [http://www.uniprot.org/uniprot/Q16798 Q16798]
+
−
** [http://www.uniprot.org/uniprot/O50015 O50015]
+
−
** [http://www.uniprot.org/uniprot/O04935 O04935]
+
−
** [http://www.uniprot.org/uniprot/O04936 O04936]
+
−
** [http://www.uniprot.org/uniprot/P37222 P37222]
+
−
** [http://www.uniprot.org/uniprot/Q42888 Q42888]
+
−
** [http://www.uniprot.org/uniprot/Q42889 Q42889]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Malic oxidoreductase}}
+
{{#set: ec number=EC-2.5.1.115}}
−
{{#set: ec number=EC-1.1.1.40}}
+
{{#set: gene associated=Ec-21_000990}}
−
{{#set: gene associated=Ec-01_003680}}
+
{{#set: in pathway=PWY-1422}}
−
{{#set: in pathway=PWY-241|PWY-7117|GLUCONEO-PWY}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction source=aragem}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Revision as of 21:50, 17 March 2018

Reaction RXN-2541

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-1422, vitamin E biosynthesis (tocopherols): PWY-1422
    • 7 reactions found over 7 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-14_006720&oldid=14711"