Difference between revisions of "RXN-12583"

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(Created page with "Category:Gene == Gene Ec-22_003280 == * left end position: ** 3753439 * transcription direction: ** POSITIVE * right end position: ** 3757042 * centisome position: ** 83.1...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DGDPKIN-RXN DGDPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** nucleoside diphosphate...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-22_003280 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DGDPKIN-RXN DGDPKIN-RXN] ==
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* left end position:
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* direction:
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** 3753439
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** nucleoside diphosphate kinase
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* right end position:
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** Nucleoside diphosphate kinase
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** 3757042
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
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** 83.11698   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0039_0135
 
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** Esi0039_0135
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[CDPKIN-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[DGDP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[DGTP]][c] '''+''' 1 [[ADP]][c]
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***go-term
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* With common name(s):
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* [[DADPKIN-RXN]]
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** 1 dGDP[c] '''+''' 1 ATP[c] '''=>''' 1 dGTP[c] '''+''' 1 ADP[c]
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** esiliculosus_genome
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***go-term
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== Genes associated with this reaction  ==
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* [[DCDPKIN-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** esiliculosus_genome
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* [[Ec-11_005170]]
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***go-term
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** ESILICULOSUS_GENOME
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* [[DGDPKIN-RXN]]
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***GO-TERM
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** esiliculosus_genome
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* [[Ec-22_003280]]
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***go-term
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** ESILICULOSUS_GENOME
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* [[DTDPKIN-RXN]]
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***GO-TERM
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** esiliculosus_genome
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* [[Ec-04_001140]]
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***go-term
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** ESILICULOSUS_GENOME
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* [[DUDPKIN-RXN]]
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***GO-TERM
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** esiliculosus_genome
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** [[pantograph]]-[[aragem]]
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***go-term
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* [[Ec-26_003930]]
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* [[GDPKIN-RXN]]
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** ESILICULOSUS_GENOME
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** esiliculosus_genome
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***GO-TERM
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***go-term
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* [[Ec-03_001380]]
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* [[NUCLEOSIDE-DIP-KIN-RXN]]
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** ESILICULOSUS_GENOME
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** esiliculosus_genome
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***GO-TERM
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***go-term
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* [[Ec-11_004330]]
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* [[RXN-14120]]
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** ESILICULOSUS_GENOME
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** esiliculosus_genome
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***EC-NUMBER
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***go-term
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** [[pantograph]]-[[aragem]]
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* [[RXN-14228]]
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* [[Ec-07_000140]]
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** esiliculosus_genome
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** ESILICULOSUS_GENOME
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***go-term
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***GO-TERM
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* [[UDPKIN-RXN]]
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== Pathways ==
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** esiliculosus_genome
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* [[PWY-7222]], guanosine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7222 PWY-7222]
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***go-term
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Pathways associated ==
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* [[PWY-7224]], purine deoxyribonucleosides salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7224 PWY-7224]
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* [[PWY-7210]]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7198]]
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* [[PWY-7226]], guanosine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7226 PWY-7226]
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* [[PWY-7176]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7220]]
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== Reconstruction information  ==
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* [[PWY-7184]]
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* Category: [[orthology]]
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* [[PWY-7222]]
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** Source: [[orthology-aragem]]
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* [[PWY-7205]]
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*** Tool: [[pantograph]]
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* [[PWY-7224]]
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* Category: [[annotation]]
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* [[PWY-7197]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY0-166]]
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*** Tool: [[pathwaytools]]
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* [[PWY-7227]]
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* [[PPGPPMET-PWY]]
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* [[PWY-7226]]
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* [[PWY-7221]]
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* [[PWY-6545]]
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* [[PWY-7187]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=3753439}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27690 27690]
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{{#set: right end position=3757042}}
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* LIGAND-RXN:
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{{#set: centisome position=83.11698    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01857 R01857]
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{{#set: common name=Esi_0039_0135|Esi0039_0135}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=CDPKIN-RXN|DADPKIN-RXN|DCDPKIN-RXN|DGDPKIN-RXN|DTDPKIN-RXN|DUDPKIN-RXN|GDPKIN-RXN|NUCLEOSIDE-DIP-KIN-RXN|RXN-14120|RXN-14228|UDPKIN-RXN}}
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{{#set: common name=nucleoside diphosphate kinase}}
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{{#set: pathway associated=PWY-7210|PWY-7198|PWY-7176|PWY-7220|PWY-7184|PWY-7222|PWY-7205|PWY-7224|PWY-7197|PWY0-166|PWY-7227|PPGPPMET-PWY|PWY-7226|PWY-7221|PWY-6545|PWY-7187}}
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{{#set: common name=Nucleoside diphosphate kinase}}
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{{#set: ec number=EC-2.7.4.6}}
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{{#set: gene associated=Ec-11_005170|Ec-22_003280|Ec-04_001140|Ec-26_003930|Ec-03_001380|Ec-11_004330|Ec-07_000140}}
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{{#set: in pathway=PWY-7222|PWY-7224|PWY-7226}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 21:51, 17 March 2018

Reaction DGDPKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • nucleoside diphosphate kinase
    • Nucleoside diphosphate kinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 dGDP[c] + 1 ATP[c] => 1 dGTP[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7222, guanosine deoxyribonucleotides de novo biosynthesis II: PWY-7222
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7224, purine deoxyribonucleosides salvage: PWY-7224
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-7226, guanosine deoxyribonucleotides de novo biosynthesis I: PWY-7226
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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