Difference between revisions of "1-KETO-2-METHYLVALERATE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYL-COA-OXIDASE-RXN ACYL-COA-OXIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-162 RXN1F-162] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYL-COA-OXIDASE-RXN ACYL-COA-OXIDASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-162 RXN1F-162] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** acyl-CoA oxidase, partial
 
−
** acyl-CoA oxidase
 
−
** Acyl-CoA oxidase/dehydrogenase, central domain
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
+
** [http://enzyme.expasy.org/EC/1.14.11 EC-1.14.11]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[ACYL-COA]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[TRANS-D2-ENOYL-COA]][c]
+
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD1F-95]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[CPD1F-97]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 oxygen[c] '''+''' 1 an acyl-CoA[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 a trans-2-enoyl-CoA[c]
+
** 1 oxygen[c] '''+''' 1 gibberellin A12[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 gibberellin A15 (open lactone form)[c] '''+''' 1 CO2[c] '''+''' 1 succinate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-26_004320]]
+
* [[Ec-19_002750]]
−
** ESILICULOSUS_GENOME
+
** [[pantograph]]-[[aragem]]
−
***EC-NUMBER
+
* [[Ec-08_003510]]
−
* [[Ec-22_002920]]
+
** [[pantograph]]-[[aragem]]
−
** ESILICULOSUS_GENOME
+
* [[Ec-19_002760]]
−
***EC-NUMBER
+
** [[pantograph]]-[[aragem]]
−
* [[Ec-08_006390]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7007]], methyl ketone biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7007 PWY-7007]
+
* [[PWY-5070]], gibberellin biosynthesis I (non C-3, non C-13 hydroxylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5070 PWY-5070]
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-aragem]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* PIR:
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52121 T52121]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52120 T52120]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T04418 T04418]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S64224 S64224]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S40722 S40722]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXRTA2 OXRTA2]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXRTA1 OXRTA1]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXCKX5 OXCKX5]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXCKX4 OXCKX4]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXCKX OXCKX]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXCKPM OXCKPM]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXCKP2 OXCKP2]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXCKAX OXCKAX]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4563 JC4563]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I38095 I38095]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=B54942 B54942]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A54942 A54942]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00388 R00388]
+
** [http://www.genome.jp/dbget-bin/www_bget?R06322 R06322]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/Q15067 Q15067]
+
−
** [http://www.uniprot.org/uniprot/Q00468 Q00468]
+
−
** [http://www.uniprot.org/uniprot/P06598 P06598]
+
−
** [http://www.uniprot.org/uniprot/P11356 P11356]
+
−
** [http://www.uniprot.org/uniprot/P07872 P07872]
+
−
** [http://www.uniprot.org/uniprot/P34355 P34355]
+
−
** [http://www.uniprot.org/uniprot/P13711 P13711]
+
−
** [http://www.uniprot.org/uniprot/O23977 O23977]
+
−
** [http://www.uniprot.org/uniprot/O65201 O65201]
+
−
** [http://www.uniprot.org/uniprot/O65202 O65202]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=acyl-CoA oxidase, partial}}
+
{{#set: ec number=EC-1.14.11}}
−
{{#set: common name=acyl-CoA oxidase}}
+
{{#set: gene associated=Ec-19_002750|Ec-08_003510|Ec-19_002760}}
−
{{#set: common name=Acyl-CoA oxidase/dehydrogenase, central domain}}
+
{{#set: in pathway=PWY-5070}}
−
{{#set: ec number=EC-1.3.3.6}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: gene associated=Ec-26_004320|Ec-22_002920|Ec-08_006390}}
+
{{#set: reconstruction source=orthology-aragem}}
−
{{#set: in pathway=PWY-7007}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Revision as of 21:54, 17 March 2018

Reaction RXN1F-162

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5070, gibberellin biosynthesis I (non C-3, non C-13 hydroxylation): PWY-5070
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links




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