Difference between revisions of "RXN-9536"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15288 RXN-15288] == * direction: ** LEFT-TO-RIGHT * common name: ** luteolin-7-O-diglucuronide...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8988 RXN-8988] == * direction: ** LEFT-TO-RIGHT * common name: ** Succinate--CoA ligase (GDP-fo...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15288 RXN-15288] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8988 RXN-8988] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** luteolin-7-O-diglucuronide peroxidase
+
** Succinate--CoA ligase (GDP-forming), alpha subunit
** peroxidase
+
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/1.11.1.7 EC-1.11.1.7]
+
** [http://enzyme.expasy.org/EC/6.2.1.4 EC-6.2.1.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 2 [[LUTEOLIN-7-O-BETA-D-DIGLUCURONIDE]][c] '''=>''' 2 [[WATER]][c] '''+''' 2 [[a-radical-of-luteolin-7-iOi-diglucuronid]][c]
+
** 1 [[CO-A]][c] '''+''' 1 [[GTP]][c] '''+''' 1 [[ITACONATE]][c] '''=>''' 1 [[CPD-1137]][c] '''+''' 1 [[GDP]][c] '''+''' 1 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
** 1 hydrogen peroxide[c] '''+''' 2 luteolin 7-O-β-D-diglucuronide[c] '''=>''' 2 H2O[c] '''+''' 2 a radical of luteolin-7-O-diglucuronide[c]
+
** 1 coenzyme A[c] '''+''' 1 GTP[c] '''+''' 1 itaconate[c] '''=>''' 1 itaconyl-CoA[c] '''+''' 1 GDP[c] '''+''' 1 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Ec-27_004950]]
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* [[Ec-10_000030]]
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
***GO-TERM
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***EC-NUMBER
* [[Ec-00_008240]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-24_002370]]
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** ESILICULOSUS_GENOME
+
***GO-TERM
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* [[Ec-02_001740]]
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** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-16_000240]]
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** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-02_001880]]
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** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-17_002430]]
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** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-00_008250]]
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** ESILICULOSUS_GENOME
+
***GO-TERM
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* [[Ec-00_008220]]
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** ESILICULOSUS_GENOME
+
***GO-TERM
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* [[Ec-05_003380]]
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** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-20_002770]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-11_003410]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-08_006020]]
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** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-19_001450]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-28_003740]]
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** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-14_006530]]
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** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-04_004690]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-02_000470]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-00_008210]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-17_002450]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-26_000310]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-02_003170]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-02_001210]]
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** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-11_001530]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-24_002030]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-19_000230]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-00_010030]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-06_003550]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-14_002880]]
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** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-05_002520]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-7445]], luteolin triglucuronide degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7445 PWY-7445]
+
* [[PWY-5749]], itaconate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5749 PWY-5749]
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[annotation]]:
+
* Category: [[annotation]]
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02405 R02405]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=luteolin-7-O-diglucuronide peroxidase}}
+
{{#set: common name=Succinate--CoA ligase (GDP-forming), alpha subunit}}
{{#set: common name=peroxidase}}
+
{{#set: ec number=EC-6.2.1.4}}
{{#set: ec number=EC-1.11.1.7}}
+
{{#set: gene associated=Ec-10_000030}}
{{#set: gene associated=Ec-27_004950|Ec-00_008240|Ec-24_002370|Ec-02_001740|Ec-16_000240|Ec-02_001880|Ec-17_002430|Ec-00_008250|Ec-00_008220|Ec-05_003380|Ec-20_002770|Ec-11_003410|Ec-08_006020|Ec-19_001450|Ec-28_003740|Ec-14_006530|Ec-04_004690|Ec-02_000470|Ec-00_008210|Ec-17_002450|Ec-26_000310|Ec-02_003170|Ec-02_001210|Ec-11_001530|Ec-24_002030|Ec-19_000230|Ec-00_010030|Ec-06_003550|Ec-14_002880|Ec-05_002520}}
+
{{#set: in pathway=PWY-5749}}
{{#set: in pathway=PWY-7445}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction source=esiliculosus_genome}}
 

Revision as of 21:55, 17 March 2018

Reaction RXN-8988

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Succinate--CoA ligase (GDP-forming), alpha subunit
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 GTP[c] + 1 itaconate[c] => 1 itaconyl-CoA[c] + 1 GDP[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5749, itaconate degradation: PWY-5749
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links