Difference between revisions of "Double-Stranded-DNAs"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTPRATPHYD-RXN HISTPRATPHYD-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphoribosy...")
 
(Created page with "Category:Gene == Gene Ec-21_005710 == * left end position: ** 6625199 * transcription direction: ** NEGATIVE * right end position: ** 6634691 * centisome position: ** 89.7...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTPRATPHYD-RXN HISTPRATPHYD-RXN] ==
+
== Gene Ec-21_005710 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 6625199
−
* common name:
+
* transcription direction:
−
** phosphoribosyl-ATP diphosphatase
+
** NEGATIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/3.6.1.31 EC-3.6.1.31]
+
** 6634691
 +
* centisome position:
 +
** 89.7709   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0014_0076
 +
** Esi0014_0076
 +
** PGK
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[PHOSGLYPHOS-RXN]]
−
** 1 [[PHOSPHORIBOSYL-ATP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PHOSPHORIBOSYL-AMP]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[PPI]][c]
+
** esiliculosus_genome
−
* With common name(s):
+
***ec-number
−
** 1 1-(5-phospho-β-D-ribosyl)-ATP[c] '''+''' 1 H2O[c] '''=>''' 1 1-(5-phospho-β-D-ribosyl)-AMP[c] '''+''' 2 H+[c] '''+''' 1 diphosphate[c]
+
** [[pantograph]]-[[aragem]]
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-19_001690]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
 
** [[pantograph]]-[[aragem]]
 
** [[pantograph]]-[[aragem]]
−
== Pathways ==
+
== Pathways associated ==
−
* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
+
* [[PWY-1042]]
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
* [[PWY-7003]]
−
== Reconstruction information  ==
+
* [[GLYCOLYSIS]]
−
* [[orthology]]:
+
* [[SUCSYN-PWY]]
−
** [[pantograph]]:
+
* [[PWY-6901]]
−
*** [[aragem]]
+
* [[P124-PWY]]
−
* [[annotation]]:
+
* [[PWY-6886]]
−
** [[pathwaytools]]:
+
* [[CALVIN-PWY]]
−
*** [[esiliculosus_genome]]
+
* [[ANAGLYCOLYSIS-PWY]]
 +
* [[GLUCONEO-PWY]]
 +
* [[P122-PWY]]
 +
* [[P185-PWY]]
 +
* [[PWY-5484]]
 +
* [[PWY66-399]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=6625199}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22828 22828]
+
{{#set: transcription direction=NEGATIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=6634691}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R04035 R04035]
+
{{#set: centisome position=89.7709    }}
−
* UNIPROT:
+
{{#set: common name=Esi_0014_0076|Esi0014_0076|PGK}}
−
** [http://www.uniprot.org/uniprot/P44434 P44434]
+
{{#set: reaction associated=PHOSGLYPHOS-RXN}}
−
** [http://www.uniprot.org/uniprot/Q9X0C5 Q9X0C5]
+
{{#set: pathway associated=PWY-1042|PWY-7003|GLYCOLYSIS|SUCSYN-PWY|PWY-6901|P124-PWY|PWY-6886|CALVIN-PWY|ANAGLYCOLYSIS-PWY|GLUCONEO-PWY|P122-PWY|P185-PWY|PWY-5484|PWY66-399}}
−
** [http://www.uniprot.org/uniprot/Q9PM71 Q9PM71]
+
−
** [http://www.uniprot.org/uniprot/Q02130 Q02130]
+
−
** [http://www.uniprot.org/uniprot/Q9RWD6 Q9RWD6]
+
−
** [http://www.uniprot.org/uniprot/Q9K0J4 Q9K0J4]
+
−
** [http://www.uniprot.org/uniprot/O34912 O34912]
+
−
** [http://www.uniprot.org/uniprot/P0A5B1 P0A5B1]
+
−
** [http://www.uniprot.org/uniprot/Q9KSW7 Q9KSW7]
+
−
** [http://www.uniprot.org/uniprot/Q9HUB6 Q9HUB6]
+
−
** [http://www.uniprot.org/uniprot/Q57750 Q57750]
+
−
** [http://www.uniprot.org/uniprot/O27344 O27344]
+
−
** [http://www.uniprot.org/uniprot/Q9JVJ9 Q9JVJ9]
+
−
** [http://www.uniprot.org/uniprot/O67780 O67780]
+
−
** [http://www.uniprot.org/uniprot/Q9PBD1 Q9PBD1]
+
−
** [http://www.uniprot.org/uniprot/P26722 P26722]
+
−
** [http://www.uniprot.org/uniprot/P45353 P45353]
+
−
** [http://www.uniprot.org/uniprot/Q12670 Q12670]
+
−
** [http://www.uniprot.org/uniprot/P50935 P50935]
+
−
** [http://www.uniprot.org/uniprot/P00815 P00815]
+
−
** [http://www.uniprot.org/uniprot/P07685 P07685]
+
−
** [http://www.uniprot.org/uniprot/O59667 O59667]
+
−
** [http://www.uniprot.org/uniprot/O82768 O82768]
+
−
** [http://www.uniprot.org/uniprot/P10367 P10367]
+
−
** [http://www.uniprot.org/uniprot/P06989 P06989]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=phosphoribosyl-ATP diphosphatase}}
+
−
{{#set: ec number=EC-3.6.1.31}}
+
−
{{#set: gene associated=Ec-19_001690}}
+
−
{{#set: in pathway=HISTSYN-PWY}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=aragem}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Revision as of 22:56, 17 March 2018

Gene Ec-21_005710

  • left end position:
    • 6625199
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 6634691
  • centisome position:
    • 89.7709
  • Synonym(s):
    • Esi_0014_0076
    • Esi0014_0076
    • PGK

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Double-Stranded-DNAs&oldid=15103"