Difference between revisions of "SAMDECARB-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SAMDECARB-RXN SAMDECARB-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** S-adenosylmethionin...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLACETOACETYLCOATHIOL-RXN METHYLACETOACETYLCOATHIOL-RXN] == * direction: ** REVERSIBLE * common...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SAMDECARB-RXN SAMDECARB-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLACETOACETYLCOATHIOL-RXN METHYLACETOACETYLCOATHIOL-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** S-adenosylmethionine decarboxylase subgroup
+
** Thiolase, C-terminal
−
** S-Adenosylmethionine decarboxylase
+
** Acetyl-CoA acetyltransferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.1.1.50 EC-4.1.1.50]
+
** [http://enzyme.expasy.org/EC/2.3.1.9 EC-2.3.1.9]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[S-ADENOSYLMETHIONINAMINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** 1 [[2-METHYL-ACETO-ACETYL-COA]][c] '''+''' 1 [[CO-A]][c] '''<=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[PROPIONYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 S-adenosyl-L-methionine[c] '''+''' 1 H+[c] '''=>''' 1 S-adenosyl 3-(methylthio)propylamine[c] '''+''' 1 CO2[c]
+
** 1 2-methylacetoacetyl-CoA[c] '''+''' 1 coenzyme A[c] '''<=>''' 1 acetyl-CoA[c] '''+''' 1 propanoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-22_002520]]
+
* [[Ec-22_002850]]
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
 
***EC-NUMBER
 
***EC-NUMBER
 +
* [[Ec-26_003940]]
 
** [[pantograph]]-[[aragem]]
 
** [[pantograph]]-[[aragem]]
−
* [[Ec-27_006890]]
+
* [[Ec-24_000870]]
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
 
***EC-NUMBER
 
***EC-NUMBER
−
** [[pantograph]]-[[aragem]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[ARGSPECAT-PWY]], spermine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=ARGSPECAT-PWY ARGSPECAT-PWY]
+
* [[PWY-5109]], 2-methylbutanoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5109 PWY-5109]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''6''' reactions in the full pathway
−
* [[BSUBPOLYAMSYN-PWY]], spermidine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=BSUBPOLYAMSYN-PWY BSUBPOLYAMSYN-PWY]
+
* [[ILEUDEG-PWY]], L-isoleucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ILEUDEG-PWY ILEUDEG-PWY]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-6834]], spermidine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6834 PWY-6834]
+
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-aragem]]
−
*** [[aragem]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15981 15981]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30721 30721]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00178 R00178]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00927 R00927]
−
* UNIPROT:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.uniprot.org/uniprot/P82184 P82184]
+
{{#set: common name=Thiolase, C-terminal}}
−
** [http://www.uniprot.org/uniprot/P21182 P21182]
+
{{#set: common name=Acetyl-CoA acetyltransferase}}
−
** [http://www.uniprot.org/uniprot/P0A7F6 P0A7F6]
+
{{#set: ec number=EC-2.3.1.9}}
−
** [http://www.uniprot.org/uniprot/P17707 P17707]
+
{{#set: gene associated=Ec-22_002850|Ec-26_003940|Ec-24_000870}}
−
** [http://www.uniprot.org/uniprot/P28918 P28918]
+
{{#set: in pathway=PWY-5109|ILEUDEG-PWY}}
−
** [http://www.uniprot.org/uniprot/P17708 P17708]
+
{{#set: reconstruction category=orthology|annotation}}
−
** [http://www.uniprot.org/uniprot/P50243 P50243]
+
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
−
** [http://www.uniprot.org/uniprot/P46255 P46255]
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
** [http://www.uniprot.org/uniprot/Q04694 Q04694]
+
−
** [http://www.uniprot.org/uniprot/Q42679 Q42679]
+
−
** [http://www.uniprot.org/uniprot/Q42829 Q42829]
+
−
** [http://www.uniprot.org/uniprot/P79888 P79888]
+
−
** [http://www.uniprot.org/uniprot/O04009 O04009]
+
−
** [http://www.uniprot.org/uniprot/O24575 O24575]
+
−
** [http://www.uniprot.org/uniprot/Q43820 Q43820]
+
−
** [http://www.uniprot.org/uniprot/Q39676 Q39676]
+
−
** [http://www.uniprot.org/uniprot/Q39677 Q39677]
+
−
** [http://www.uniprot.org/uniprot/O49972 O49972]
+
−
** [http://www.uniprot.org/uniprot/O65354 O65354]
+
−
** [http://www.uniprot.org/uniprot/O02655 O02655]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=S-adenosylmethionine decarboxylase subgroup}}
+
−
{{#set: common name=S-Adenosylmethionine decarboxylase}}
+
−
{{#set: ec number=EC-4.1.1.50}}
+
−
{{#set: gene associated=Ec-22_002520|Ec-27_006890}}
+
−
{{#set: in pathway=ARGSPECAT-PWY|BSUBPOLYAMSYN-PWY|PWY-6834}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=aragem}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Revision as of 22:01, 17 March 2018

Reaction METHYLACETOACETYLCOATHIOL-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Thiolase, C-terminal
    • Acetyl-CoA acetyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5109, 2-methylbutanoate biosynthesis: PWY-5109
    • 4 reactions found over 6 reactions in the full pathway
  • ILEUDEG-PWY, L-isoleucine degradation I: ILEUDEG-PWY
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=SAMDECARB-RXN&oldid=15460"