Difference between revisions of "Ec-13 004470"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBULOKINASE-RXN PHOSPHORIBULOKINASE-RXN] == * direction: ** REVERSIBLE * common name: ** Ph...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17776 RXN-17776] == * direction: ** LEFT-TO-RIGHT * common name: ** ClpP/crotonase-like domain...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBULOKINASE-RXN PHOSPHORIBULOKINASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17776 RXN-17776] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Phosphoribulokinase/uridine kinase
+
** ClpP/crotonase-like domain
−
** P-loop containing nucleoside triphosphate hydrolase
+
** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
 +
** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.1.19 EC-2.7.1.19]
+
** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[RIBULOSE-5P]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[D-RIBULOSE-15-P2]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[CPD-19172]][c] '''=>''' 1 [[CPD-19171]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 D-ribulose 5-phosphate[c] '''+''' 1 ATP[c] '''<=>''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 D-ribulose-1,5-bisphosphate[c]
+
** 1 H2O[c] '''+''' 1 (2E,9Z)-octadecenoyl-CoA[c] '''=>''' 1 (S)-3-hydroxy-(9Z)-octadecenoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-26_002450]]
+
* [[Ec-16_003560]]
 +
** ESILICULOSUS_GENOME
 +
***EC-NUMBER
 +
* [[Ec-16_001250]]
 +
** ESILICULOSUS_GENOME
 +
***EC-NUMBER
 +
* [[Ec-14_006530]]
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
***AUTOMATED-NAME-MATCH
−
* [[Ec-27_003910]]
+
* [[Ec-06_001380]]
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
 
***EC-NUMBER
 
***EC-NUMBER
−
** [[pantograph]]-[[aragem]]
 
−
** [[pantograph]]-[[aragem]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
 
−
** '''13''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-5723]], Rubisco shunt: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723]
 
−
** '''10''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[aragem]]
+
*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19365 19365]
+
{{#set: common name=ClpP/crotonase-like domain}}
−
* LIGAND-RXN:
+
{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01523 R01523]
+
{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
−
* UNIPROT:
+
{{#set: ec number=EC-4.2.1.17}}
−
** [http://www.uniprot.org/uniprot/P23010 P23010]
+
{{#set: gene associated=Ec-16_003560|Ec-16_001250|Ec-14_006530|Ec-06_001380}}
−
** [http://www.uniprot.org/uniprot/P0AEX5 P0AEX5]
+
{{#set: in pathway=}}
−
** [http://www.uniprot.org/uniprot/P19923 P19923]
+
−
** [http://www.uniprot.org/uniprot/P19924 P19924]
+
−
** [http://www.uniprot.org/uniprot/P23015 P23015]
+
−
** [http://www.uniprot.org/uniprot/P12033 P12033]
+
−
** [http://www.uniprot.org/uniprot/Q8GRU9 Q8GRU9]
+
−
** [http://www.uniprot.org/uniprot/P09559 P09559]
+
−
** [http://www.uniprot.org/uniprot/P25697 P25697]
+
−
** [http://www.uniprot.org/uniprot/P93681 P93681]
+
−
** [http://www.uniprot.org/uniprot/P19824 P19824]
+
−
** [http://www.uniprot.org/uniprot/P27774 P27774]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=Phosphoribulokinase/uridine kinase}}
+
−
{{#set: common name=P-loop containing nucleoside triphosphate hydrolase}}
+
−
{{#set: ec number=EC-2.7.1.19}}
+
−
{{#set: gene associated=Ec-26_002450|Ec-27_003910}}
+
−
{{#set: in pathway=CALVIN-PWY|PWY-5723}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=aragem}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Revision as of 22:02, 17 March 2018

Reaction RXN-17776

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ClpP/crotonase-like domain
    • Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
    • enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 (2E,9Z)-octadecenoyl-CoA[c] => 1 (S)-3-hydroxy-(9Z)-octadecenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-13_004470&oldid=15501"